Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0323 ATGAAAATGTTATTATTTATTTGGTTCTTAATATTTTCCTATACTATAAGAGCTTCCACTTCACTAGACACTTTAGCAGTGGGTGAATCTATCCAAGATGGTAAGACTTTAGTTTCATCAAATGGAATTATTGAAGTGGGTTTCTTTAGCCCTCAAAATTCAACAAGAAGATTAAGATACTTAGGTATATGGTATAGGAATGTGTCCCCTTTAACAGTTGTATGGGTAGCCAACAAAGAAAAACCTCTACAACATAGCTCAGGAGTTTTGACACTCAATGAAAAGGGAATTCTAATGCTTCTCAATGATGTAAATAGCACTATTTGGTCTTCTAATGCATCAAGCATAGCATGGAATAGTACTACTCCAATTGCTCAGCTCTTGGATACTGGAAATCTTGTAGTGAAAAATAGACATGAAACTGAGAAAGATGTGTTTTTGTGGCAGAGTTTTGATTATCCCGGTGATACGTTGATGCCAGGAATGAAGCTTGGATGGGACTTAGAAACTGGTCTAGAAAGATTTATAACATCTTGGAAAAGTGTTGATGATCCTGCTAAGGGAGAATTTACTACAAGAGTTGATCTTAGAGGATATCCACAAGTAATTATGTTCAATGGATCTGATATAATATTTAGATCAGGGCCATGGAATGGTCATTCTTTGGCTGGATCACCAGGTCCAAATTCTGTATTGTCACAATTTTTTGTGTTCAATGAAAAACAAGTGTACTATGAATACCAACTTCTTGACAGATCAATATTCAGTGTACTTAAATTAATGCCTTATGGACCTCAGAATTTGTTTTGGACAAGTCAATCAAGCATAAGACAAGTTTTGTCAACAAGCTTAGATGAATGTCAAATATATGCATTTTGTGGTGCAAATTCTGTATGTACTATTGATGGTAATAACCATTCAAATTGTGAATGCATGAAAGGATATGCTCCTAAGTTTCCTGAAGAATGGAATCTAGCATTTTGGTCGAATGGTTGTATACAAAAGAAGAATTCAAGTTACATAGATGGTTTCTTGAAATACACACTCATGAAAGTGCCAGACACGTCTTCGTCATGGTTTAGTAAGACGTTGAATCTTGAGGAATGCCGGAAGTGGTGTCTGAGAAATAGTTCGTGTGTAGCGTATGCAAATATTGATATACGTAACGGAGGAAGTGGATGTCTGATATGGTTTAATAATCTGATAGATGTGAGGAAATTCTCTCAATGGGGACAAGATCTTTATGTTAGAATCCCTCCTTCAGAATTAGATCAACTTGCAGAAGATGGCCACAGAACCAACAAGAATAAGATAGTAGGAATCACACTTGGTGTGATTATTTTTGGATTAATTACATTTTTATCCATATGGATTATGAAAAATCCAGGTGTTGCAAGAAAGGTTTGCAGCAAAATTTTCAATACTAAACAAAGAAAGGAAGACCTTGATTTAACAACGTTCGATTTGTCCGTCTTGGTTAAAGCCACCGAAAACTTTTCGAGCAATAACAAACTTGGAGAAGGTGGTTTTGGACCGGTATACAAGGGCACAATGATAGATGGGCAAGAGATAGCTGTGAAAAGGCTTTCAAAGAAGTCTGGACAAGGGTTGCAGGAATTCAAAAATGAAGCGGCGTTGATTGCCAAACTTCAACACCGTAATCTTGTCAAACTTCTTGGATGCTGCATTGAAGGAGGAGAAACAATGCTGATCTATGAATACATGCCCAACAAAAGCTTGGACTACTTTGTTTTTGATGAAATTAAAAGGAAGTCACTAGATTGGATCAAGCGTTTCGACATTATCAATGGTATTGCTCGGGGACTTCTTTATCTTCACCGTGACTCTAGGCTGAGGATAGTCCATAGAGATCTAAAAGCTAGCAATATATTACTGGATGCAAATTTGGATCCAAAAATATCAGACTTTGGTTTGGCTCGAACATTTTTCGGAGAGCAAGTTGAGGAAAACACAAATAGGGTGGCCGGAACATACGGTTACATGCCTCCAGAGTACGCTAGGAGTGGACATTTCTCAACGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTGGAGATTGTGTCCGGAAAGAAGAATAGAGATTTTTCAGACTCAGAATATTCCAACTATCTTCTTGGATATGCATGGAGATTATGGACAGAAGAGAGGGCATTGGAACTATTGGATGAAAGTTTAGGGCAACAATGTACACCCTCAGAAGTCGTTCGATGCATACAAATTGCGTTATTATGTGTTCAACAAAGACCAGAAGATAGGCCAGAAATTTCATCTGTGGTTCTAATGCTGATCAATGGTGAAAAATTATTGCCAAAGCCAAAGGTTCCTGGATTTTACACCGAAAAAGATGTTACACCTGAGTTAGATTCTTCGCTTGCGAATCATGAACTATTTTCGACTAATGAATTATCCATCACAGAGATAGTTGCAAGGTTTACACTTTGA 2466 0.3719 MKMLLFIWFLIFSYTIRASTSLDTLAVGESIQDGKTLVSSNGIIEVGFFSPQNSTRRLRYLGIWYRNVSPLTVVWVANKEKPLQHSSGVLTLNEKGILMLLNDVNSTIWSSNASSIAWNSTTPIAQLLDTGNLVVKNRHETEKDVFLWQSFDYPGDTLMPGMKLGWDLETGLERFITSWKSVDDPAKGEFTTRVDLRGYPQVIMFNGSDIIFRSGPWNGHSLAGSPGPNSVLSQFFVFNEKQVYYEYQLLDRSIFSVLKLMPYGPQNLFWTSQSSIRQVLSTSLDECQIYAFCGANSVCTIDGNNHSNCECMKGYAPKFPEEWNLAFWSNGCIQKKNSSYIDGFLKYTLMKVPDTSSSWFSKTLNLEECRKWCLRNSSCVAYANIDIRNGGSGCLIWFNNLIDVRKFSQWGQDLYVRIPPSELDQLAEDGHRTNKNKIVGITLGVIIFGLITFLSIWIMKNPGVARKVCSKIFNTKQRKEDLDLTTFDLSVLVKATENFSSNNKLGEGGFGPVYKGTMIDGQEIAVKRLSKKSGQGLQEFKNEAALIAKLQHRNLVKLLGCCIEGGETMLIYEYMPNKSLDYFVFDEIKRKSLDWIKRFDIINGIARGLLYLHRDSRLRIVHRDLKASNILLDANLDPKISDFGLARTFFGEQVEENTNRVAGTYGYMPPEYARSGHFSTKSDVFSYGVIVLEIVSGKKNRDFSDSEYSNYLLGYAWRLWTEERALELLDESLGQQCTPSEVVRCIQIALLCVQQRPEDRPEISSVVLMLINGEKLLPKPKVPGFYTEKDVTPELDSSLANHELFSTNELSITEIVARFTL* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0323 821 ProSiteProfiles EGF-like domain profile. 283 321 IPR000742 -
Mtr6g0323 821 CDD B_lectin 29 154 IPR001480 -
Mtr6g0323 821 Gene3D - 17 151 IPR036426 -
Mtr6g0323 821 SMART blect_4 28 154 IPR001480 -
Mtr6g0323 821 ProSiteProfiles PAN/Apple domain profile. 332 419 IPR003609 -
Mtr6g0323 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 815 - -
Mtr6g0323 821 Pfam PAN-like domain 341 404 IPR003609 -
Mtr6g0323 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Mtr6g0323 821 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544
Mtr6g0323 821 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0323 821 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Mtr6g0323 821 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 17 815 - -
Mtr6g0323 821 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Mtr6g0323 821 SMART ntp_6 339 418 IPR003609 -
Mtr6g0323 821 ProSiteProfiles Bulb-type lectin domain profile. 22 148 IPR001480 -
Mtr6g0323 821 CDD PAN_AP_plant 336 419 - -
Mtr6g0323 821 Pfam D-mannose binding lectin 72 180 IPR001480 -
Mtr6g0323 821 PIRSF SRK 1 818 IPR024171 GO:0004674
Mtr6g0323 821 ProSiteProfiles Protein kinase domain profile. 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0323 821 CDD STKc_IRAK 505 770 - -
Mtr6g0323 821 Gene3D Hepatocyte Growth Factor 337 415 - -
Mtr6g0323 821 Pfam Protein tyrosine and serine/threonine kinase 502 768 IPR001245 GO:0004672|GO:0006468
Mtr6g0323 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Mtr6g0323 821 SUPERFAMILY Protein kinase-like (PK-like) 483 783 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0323 Mtr-Chr6 3917104 3921736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0323 427 786 Receptor kinase-like Gene Family AT4G23190 52.033 2.32e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g0323 PK_Tyr_Ser-Thr 7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0323 - - mtr:MTR_6g012810 1619.36