Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0322 ATGGCACCTTTTGTATTGACAGTGTCACAAAATGGAACAGGAAACTACAGAACTGTACAAGAAGCTATTGATGCAGTGCCGCTCAGAAACACACGCCGGACGATCATAAGGATATCGCCGGGAATCTACCGGCAACCACTTTATGTGGCAAAGACTAAGAATTTCATCACTTTCGTTGGTTTGTGTCCTGAAGATACCGTTCTCACATGGAATAACACTGCCAATAAAATTGATCACCACCAAGGTTCAAAGGTGATAGGGAATGGGACTTTTGGTTGTGGAAGCACCATTGTGGAAGGGGAAGATTTTATTGCTGAGAATATTACTTTTGAGAATTTTTCTCCTGAGGGTTCAGGGCAAGCAGTGGCAGTTAGAGTATCAGGAGATAGATGTGCATTTTACAATTGCAGGTTCCTTGGGTGGCAGGACACACTTTATTTACATTCTGGCAAACAATATTTGAGAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCCCTCTTGGAGCATTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACATGAAAAGACTGGTTATGTATTTTTGAGATGTGCTATCACAGGCAATGGAGGAAGTTCATATGCATATCTTGGAAGGCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTACATGGATAATTGTATAAAGCCTGCAGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGCTTCTATGAACACAGGTGTTTTGGACCGGGTTTTTGTCCCTCAAAACGAGTGAAATGGGCTAGAGTATTGAAGGATAAAGAAGCTGAGGAGTTTCTCATGCATAGTTTCATTGATCCAGAACCACAAAAACCTTGGCTTGCTCAAAGAATGGCCTTAAGGATTCCATATTCTGCTTAG 951 0.4154 MAPFVLTVSQNGTGNYRTVQEAIDAVPLRNTRRTIIRISPGIYRQPLYVAKTKNFITFVGLCPEDTVLTWNNTANKIDHHQGSKVIGNGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAVRVSGDRCAFYNCRFLGWQDTLYLHSGKQYLRDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLRCAITGNGGSSYAYLGRPWGPFGRVVFAFTYMDNCIKPAGWNNWGKVENEKSACFYEHRCFGPGFCPSKRVKWARVLKDKEAEEFLMHSFIDPEPQKPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0322 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Mtr6g0322 316 Gene3D - 5 311 IPR012334 -
Mtr6g0322 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Mtr6g0322 316 PANTHER PECTINESTERASE 1 315 - -
Mtr6g0322 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Mtr6g0322 316 SUPERFAMILY Pectin lyase-like 3 300 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0322 Mtr-Chr6 3914511 3917332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0322 5 309 Carbohydrate Esterase AT5G47500 38.339 6.00e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0322 K01051 - gmx:100810259 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0322 6 3914511 3917332 Mtr6g0322 6 3914511 3917332 ECH