Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0319 ATGTTAATATTAGAGGCTGCAATTTCTACAGGTAGTGTTGTTGGTAGGACTAGTTCAGTTAGGACAGCAAATTCTCATCTTGGTTGTTGCGGATACGGTGAATTCGGAGGTGATTTGGCTTTGGTTGAAAACATTCCTGATCCAAAAGTAGAAGTTGGAGGAGATGGTGTGGAGAAAGTTATTATTGTTAAGCTTGGAAAGTATAGGAATGTTGCTGGTGGAGGGGAAGGAAGTAGCAGCAACAATGTGGATAACAGAAGGTGTTTTTCAATGGGATCATTTGCTTATATTATGGATGAAACTTCATCATTGCAGGTACCAATTAGAACTCCAATGAAGCAGCAGTTGAGTAAGAAGAAGAAGAATGTTTTGCCTTTGATTCCAGGTCACAGGATTGCAATGTCAGAATGTGATTGTGAATCTAGAAGAGATTTCAAATTTGCAAGCTTTTATTCAGCTAGAGCTGAGGATGTTGTTAAAGGTATTACTAGTGAGGGTGCTGGTATTGGAAGGAGAAGAAAGGAGAGTTTTTCTATATCAAAGATTAGGCTCAGAGGGAAAAAAGATAAGAAAAATGGTGATGTGGCTGATTCATCTAGAAGGGCTGTTTCATTCAGGTTTCCATTACAAAGCAATGTTGGTAGTGGTAATGATGATTTGAAGGGTAAGAATGGCATGTTTCATACAAGGAGTACTGTTTCTGAAACAAAAAAGTAG 717 0.3835 MLILEAAISTGSVVGRTSSVRTANSHLGCCGYGEFGGDLALVENIPDPKVEVGGDGVEKVIIVKLGKYRNVAGGGEGSSSNNVDNRRCFSMGSFAYIMDETSSLQVPIRTPMKQQLSKKKKNVLPLIPGHRIAMSECDCESRRDFKFASFYSARAEDVVKGITSEGAGIGRRRKESFSISKIRLRGKKDKKNGDVADSSRRAVSFRFPLQSNVGSGNDDLKGKNGMFHTRSTVSETKK* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0319 238 MobiDBLite consensus disorder prediction 208 238 - -
Mtr6g0319 238 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 38 208 - -
Mtr6g0319 238 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 38 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0319 Mtr-Chr6 3897454 3898286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0319 55 208 C3H Transcription Factor Family AT2G18650 39.412 3.55e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0319 - - mtr:MTR_6g012765 294.278