Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0314 ATGATGGATGCAATGGAGAAAAATTCAAGAGATGTTGAGAGTGATGAAAAATTTGAATTGCCACCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTACCTCTCTCAAAAAGTTCTTGATAATTCTTTTTGTGCTATAGCCATTGGTGAAGCTGATTTGAACAAGTGCGAGCCTTGGGATTTGCCTTGGAGGGCCAATATGGGTGAGAAGGAGTGGTATTTTTTCTGTGTAAGGGACAGAAAATATCCAACTGGTCTAAGGACAAATAGGGCCACATGTGCTGGATATTGGAAGGCAACAGGTAAAGACAAAGAGATATATAGAGAGAAGATACTAATTGGAATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCTAAAGGTGAAAAAACAAATTGGGTCATGCATGAATTCCGATTAGAAGACACATATTCTTTGCGAAATATATCCAAAAGAGCTATGAAGGAGTGGTCTATATGCAGAGTTTTTGAGAAAAGTTCTTGTGGAAAGAAAATGGATATTCAAGATTTGGTAAGTTTCAATTCAATTGGAAAAGAACTACTACCTCCATTGATGGATTCTTCACCATACAATAGTGAAACAAAAGCTACTATTGAAGATTCATCACATGTGACATGTTTCAATGAACCAAATCTAATTGATGATTATCAAATTACACAAGACAATGACAATAACATAGTTGGTAGCTTTGATACTCCTATGTTAACATCTTCATATTCTTCAAACCCTTCTTATGATAATATTTCTCATGTTTCATGGACCCCTAGTTTGTCACACCAATCCACACAAGTTGGAAATTCACAATCCTTTGATGTTGACATTTCATCTATGATGTACAACAATGAAATGTTTCAAGATTCATATGTGAATGAAGAATATTCATCAGATTTAGTAGGACATTTTGACACTGGTTGCTTATGGAATTATTGA 966 0.3489 MMDAMEKNSRDVESDEKFELPPGFRFHPTDEELITHYLSQKVLDNSFCAIAIGEADLNKCEPWDLPWRANMGEKEWYFFCVRDRKYPTGLRTNRATCAGYWKATGKDKEIYREKILIGMKKTLVFYKGRAPKGEKTNWVMHEFRLEDTYSLRNISKRAMKEWSICRVFEKSSCGKKMDIQDLVSFNSIGKELLPPLMDSSPYNSETKATIEDSSHVTCFNEPNLIDDYQITQDNDNNIVGSFDTPMLTSSYSSNPSYDNISHVSWTPSLSHQSTQVGNSQSFDVDISSMMYNNEMFQDSYVNEEYSSDLVGHFDTGCLWNY* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0314 321 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 300 - -
Mtr6g0314 321 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Mtr6g0314 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 13 300 - -
Mtr6g0314 321 ProSiteProfiles NAC domain profile. 20 170 IPR003441 GO:0003677|GO:0006355
Mtr6g0314 321 SUPERFAMILY NAC domain 16 170 IPR036093 GO:0003677|GO:0006355
Mtr6g0314 321 Gene3D NAC domain 29 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0314 Mtr-Chr6 3831787 3833877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0314 18 249 NAC Transcription Factor Family AT5G07680 61.803 4.58e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr6g0314 NAM 1.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0314 - - gmx:100781383 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0314 6 3831787 3833877 Mtr6g0314 6 3831787 3833877 ECH
Mtr7g0196 7 3158895 3161293 Mtr6g0314 6 3831787 3833877 ECH