Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0294 ATGGCAAGCACACATAGTATTCCATCTCATACAAAAGCTTGGGTTTACTCTCAATATGGTATTATAGAAGATGTTCTAAAGTTTGATCCTAATGTACCTACACCACACCCCAAAGAAGATCAAGTGCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTAGAGATTAAGAGGGCTCTTGGTCAGTTGAAGGATATTGACTCTCCTTTGCCAACTGTGCCAGGATATGATGTTGCTGGTGTTGTGGTTAGTGTGGGAGAGAAAGTGAATAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGACTGCTTTAAACAATCCAAAAACTGTTGGTTCTTTGTCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAGCCATCAAATTTGAGTTTTGTTGAAGCTGCTAGTCTCCCTTTAGCAATAATTACTGCTTATCAAGGTCTTGAAAGAGTAGAATTTTCTTCTGGGAAATCTCTACTTGTTCTTGGAGGTGCTGGGGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTTTTTGAGGCATCTAGAATTGCAGCTACTGCTAGCACAACAAAACTTGAATTTTTGAGGAAATTGGGAGCAGACTTGGCAATTGATTATACAAAGGAGAATTATGAAGAAATTACTGAAAAGTTTGATGTGGTGTATGATGCAGTAGGTGATAGTGAGAGGGCAGTGAAGGCTGCCAATGAAGGAGGAAAAGTTGTGACAATACTACCACCTGGAACTCCACCAGCTATCCCTTTCTTACTCACTTCAGATGGAGCAGTGTTAGAGAAATTGCAACCTTATTTGGAAAATGGCAGAGTGAGGCCAATATTGGACCCTAAGAGTCCCTTTCCACCTGGAACTCCATTATTCTGTATAAGTTGGTTTTTTAAATACAATTAG 930 0.3989 MASTHSIPSHTKAWVYSQYGIIEDVLKFDPNVPTPHPKEDQVLIKVVAAALNPVEIKRALGQLKDIDSPLPTVPGYDVAGVVVSVGEKVNKFKVGDEVYGDINETALNNPKTVGSLSEYTVAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERVEFSSGKSLLVLGGAGGVGSLVIQLAKHVFEASRIAATASTTKLEFLRKLGADLAIDYTKENYEEITEKFDVVYDAVGDSERAVKAANEGGKVVTILPPGTPPAIPFLLTSDGAVLEKLQPYLENGRVRPILDPKSPFPPGTPLFCISWFFKYN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0294 309 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Mtr6g0294 309 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 308 IPR044626 GO:0016628
Mtr6g0294 309 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 1 308 - -
Mtr6g0294 309 Pfam Alcohol dehydrogenase GroES-like domain 40 102 IPR013154 -
Mtr6g0294 309 SUPERFAMILY GroES-like 10 166 IPR011032 -
Mtr6g0294 309 SMART PKS_ER_names_mod 20 250 IPR020843 GO:0016491
Mtr6g0294 309 CDD MDR_like_2 12 293 - -
Mtr6g0294 309 Gene3D - 18 293 - -
Mtr6g0294 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Mtr6g0294 309 Pfam Zinc-binding dehydrogenase 172 251 IPR013149 -
Mtr6g0294 309 Gene3D - 153 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0294 Mtr-Chr6 3528829 3530985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0294 68 263 Monolignol Biosynthesis Gene Families AT4G37990 24.779 3.11e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0294 K18980 - gmx:100791274 430.254