Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0290 ATGTCTGCCAGTCATGTGCATTCCCGTGTATATTCCCCACATTTCAACATGGATGACATCATGTTAACTCAAATCTTTAGTGATGGAGGGCTTGACTACTTGGGTAACCCAAGCCTAGTCCACGCACAAAGCATCCTTGCTATTTGGGTTGTCCTAGCTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCCGATGGACCTCTTGGTGAGGTAGTCGATCCACTCTACCCCGGTGGAAGCTTTGACCCATTGGGCCTCGCAGACGACCCAGAGGCTTTTGCAGAGTTAAAGGTTAAAGAACTCAAGAATGGCAGGTTAGCTATGTTCTCGATGTTTGGATTTTTCGTTCAGGCCATTGTAACCGAAAAGGGACCACTAGAGAACCTTGCTGACCACATCGCTGATCCAGTCAACAGCAACGCTTGGGCCTTTGCCACAAACTTTGTTCCCGGAAAGTGA 462 0.4805 MSASHVHSRVYSPHFNMDDIMLTQIFSDGGLDYLGNPSLVHAQSILAIWVVLAILMGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0290 153 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 153 IPR001344 GO:0009765|GO:0016020
Mtr6g0290 153 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 23 153 - -
Mtr6g0290 153 SUPERFAMILY Chlorophyll a-b binding protein 24 150 - -
Mtr6g0290 153 Pfam Chlorophyll A-B binding protein 41 119 IPR022796 -
Mtr6g0290 153 Gene3D Chlorophyll a/b binding protein domain 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0290 Mtr-Chr6 3508168 3509179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0290 23 153 Chloroplast and Mitochondria Gene Families AT2G34430 89.394 7.22e-81 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0290 K08912 - osa:4324599 248.44