Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0289 ATGGCTACATCAACAATGGCTCTCTCTTCTTCAACAATGGTTGGGAAGGCAATCAAGCTTTCCCCTTCCACTCCAGACCTTGTGATGGGAAGAATCACCATGAGGAAAACAACCAACAAGAAGAACGTCCCTTCTGGAAGCCCGTGGTACGGTCCAGATCGTGTCAAATACTTGGGTCCATTCTCTGGTGAAGCTCCATCTTATCTCACTGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACATTTGCCAAGAACCGTGAACTCGAGGTCATCCACAGTAGATGGGCTATGTTAGGAGCTTTGGGATGTGTCTTCCCCGAGCTCTTGTCTCGCAATGGTGTGAAATTCGGCGAGGCTGTGTGGTTCAAGGCAGGATCTCAAATCTTTAGTGAGGGAGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCTATATGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCCGGTGGACCTCTTGGTGAGGTAGTCGACCCACTCTACCCAGGTGGAAGCTTTGACCCATTGGGCCTCGCTGACGACCCAGAGGCTTTTGCAGAGTTAAAGGTGAAAGAACTTAAGAATGGTAGGCTAGCTATGTTCTCTATGTTTGGATTCTTCGTTCAGGCCATTGTAACCGGAAAGGGACCTCTAGAGAACCTTGCCGACCATATCACTGACCCCGTCAACAACAACGCTTGGGCCTTTGCCACAAACTTTGTCCCCGGAAAGTGA 798 0.4975 MATSTMALSSSTMVGKAIKLSPSTPDLVMGRITMRKTTNKKNVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0289 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Mtr6g0289 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Mtr6g0289 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 265 - -
Mtr6g0289 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Mtr6g0289 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0289 Mtr-Chr6 3506432 3507428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0289 1 265 Chloroplast and Mitochondria Gene Families AT1G29930 86.891 3.24e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0289 K08912 - gmx:100800351 496.893