Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0274 ATGGGGATGCCTGTTGCAGTAAAAACCCTAAACAAAGAAGGAAATCAAGGGCACAAAGAATGGTTGGCTGAAATTAACCATCTTGGTGCTCTTCAACATCCAAATCTGGTTAGACTTGTTGGTTTCTGCATTGAAGATGAAAATAGGCTGCTTGTTTATGAGTTTATGCCAAAAGGAAGTTTGGAAAATCATCTATTTAAGAGACGATCTACAACTCTTACATGGGCTATGAGATTGAAAATTATGCTTGGTGCTGCAAAAGGTCTTGCATTTTTGCATGAGGAAGCTGAAAAGCCAATCATATATAGAGATTTCAAAACTTCCAATATCCTATTGGATTCGAATTATAATGCAAAACTTTCTGACTTCGGTCTTGCTAAGGATGGTCCAACGGGAGACAAAACACATGTCTCAACACAAGTAATAGGAACTCAAGGGTATGCTGATCCTGAGTATGTCATGACAGGGCACCTTAGTTCCAAGAGTGATGTCTATAGCTTTGGTGTGGTTCTCCTGGAGATGCTAACCGGAAGGAAAGCAATTGATCGGAAAAGGCCGCAAAATGAACAAAACTTGATTGAATATGTAAAACCATTCTTAAAAATACCTGGAGGAGGATTCTGTCAAGTTATGGATCCAAGATTTCAAGAACAATATTCAAAAAGAGGAGCTTACAAAGCAATGAAGATAGTTGCGCAATGCGTTTACCGTGATAAAAGAGCAAGGCCTTTAATGAGTGAAGTTGTAAAAGAGCTCAAAACTATCATTGATTACAACAATGATATTCCTACTTCACCAATGCCATCACCGTTATTGTTTAAGGTCTTGCATGATGGCACTTCCTCTTCGAATTCCTCTAGACATGGTGGTGGCGGGAGCGGTGCTAATAAATACGGTCCTAATATTGGTGCATCATCTTCAACTTCAGTTCCAGCAACTCCAACTCGATTTCAGGGTTCGCCATTGAACTTCACTCCTCCTTTACTTTCACCGATTCCTCCTCGTGGTGGAAATCGATGA 1020 0.4 MGMPVAVKTLNKEGNQGHKEWLAEINHLGALQHPNLVRLVGFCIEDENRLLVYEFMPKGSLENHLFKRRSTTLTWAMRLKIMLGAAKGLAFLHEEAEKPIIYRDFKTSNILLDSNYNAKLSDFGLAKDGPTGDKTHVSTQVIGTQGYADPEYVMTGHLSSKSDVYSFGVVLLEMLTGRKAIDRKRPQNEQNLIEYVKPFLKIPGGGFCQVMDPRFQEQYSKRGAYKAMKIVAQCVYRDKRARPLMSEVVKELKTIIDYNNDIPTSPMPSPLLFKVLHDGTSSSNSSRHGGGGSGANKYGPNIGASSSTSVPATPTRFQGSPLNFTPPLLSPIPPRGGNR* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0274 339 Pfam Protein kinase domain 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0274 339 Gene3D Transferase(Phosphotransferase) domain 1 57 264 - -
Mtr6g0274 339 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Mtr6g0274 339 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0274 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Mtr6g0274 339 MobiDBLite consensus disorder prediction 299 325 - -
Mtr6g0274 339 MobiDBLite consensus disorder prediction 276 291 - -
Mtr6g0274 339 PANTHER OS01G0588500 PROTEIN-RELATED 2 288 - -
Mtr6g0274 339 SUPERFAMILY Protein kinase-like (PK-like) 2 279 IPR011009 -
Mtr6g0274 339 MobiDBLite consensus disorder prediction 274 339 - -
Mtr6g0274 339 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0274 Mtr-Chr6 3255239 3257998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0274 2 252 Glycoside Hydrolase AT3G07070 50.988 1.32e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr6g0274 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0274 - - mtr:MTR_3g462840 603.208