Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0259 ATGCGCCAGTACGACGAACACTCTGATAAGTCCAATGTTGCCGATCGTCGTCACGCTTATCGCTCTTTCTCTTGCACTGGCCGCGACGATTTCCTCTCAGATGTTAACATGGTGGATCAATTAATGGACAATCCATTCCTTTCTGCTTCCCGTGGAATTGGATCCGGTGGAGTTCGACGTGGTTGGGATCCGGTGAAATTCTTTGCTTCTTCGTTTGGATATGCCTGGACTTGGATTCCGTGGACGGAGGAAGAGCACAAGTTGTTTTCGGTTGGATTGCAGAAAGTTGACAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAACAAGAACGCCTTCGCAGGTTGCAAGTCATGCTCAGAAGTACTTTCTCTGCCGAAGTTTGTATGATGCAACCAAAAGCAGAAATGGATCTCCAATTTCAGTCAACAAATATGAGCAATACTTAAGTGCAGTTGCATTTGCTGTTACTACTTTTGGAACGGTTGCTTTGATGAGTGGATTCTTCACTTAA 519 0.4489 MRQYDEHSDKSNVADRRHAYRSFSCTGRDDFLSDVNMVDQLMDNPFLSASRGIGSGGVRRGWDPVKFFASSFGYAWTWIPWTEEEHKLFSVGLQKVDKGDWRGISRNYVKTRTPSQVASHAQKYFLCRSLYDATKSRNGSPISVNKYEQYLSAVAFAVTTFGTVALMSGFFT* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0259 172 CDD SANT 80 125 IPR001005 -
Mtr6g0259 172 SUPERFAMILY Homeodomain-like 78 127 IPR009057 -
Mtr6g0259 172 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Mtr6g0259 172 SMART sant 77 127 IPR001005 -
Mtr6g0259 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 129 IPR017930 -
Mtr6g0259 172 ProSiteProfiles Myb-like domain profile. 80 125 IPR001005 -
Mtr6g0259 172 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 79 133 - -
Mtr6g0259 172 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 79 126 IPR006447 GO:0003677
Mtr6g0259 172 Gene3D - 81 127 - -
Mtr6g0259 172 PANTHER KIN2 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0259 Mtr-Chr6 3116662 3122619 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr6g0259 Myb_DNA-binding 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0259 - - mtr:MTR_0036s0260 165.622