Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0256 ATGGGGTTTGGGAATAAGAATGTAATTAAAGCAGGAAGTTTGGAAGTTGACAAGTCAAAGGTTGATGTTGTAAAGAAAGAGAGAAGATGTTGGTTTAGATTCAGTTGTGTTGGATGCTGTATACCTTCAAGATCAAAATTGGATAGGTCAATTTGTTGCAATGGCAATACTAGTACACAAAATGGCGATAATACCAAGTCAGTAATAATTCAATCAGAAGAAAACAAATCTACATCTGAAACAAACACAAAGGAATCAATTGGTCTTGTAGATTCCTCTACAACAACTAGCAATGGGGAGAGTATCTCCTCCACTTCGAAATTCAGCGAGGAGTTGAAGGTTGCTTCTTGTTTAAGAAAATTCACATTCAATGGACTTAAGGTAGCAACTAGGAATTTCAGACCAGAAAGTCTTCTAGGTGAAGGAGGTTTTGGTTGTGTCTTCAAAGGTTGGATTGAAGAGAATGGAACTGCGCCTGTGAAACCGGGTACCGGACTTACGGTTGCGGTTAAGATCCTTAATCACAATGGACATCAAGGTCACAAAGAATGGCTTGCTGAATTAAACTATCTGGGCGATCTTGTTCATCCTAATCTTGTTAAATTGATAGGCTTCTGTATTGAAGATGATCAAAGATTATTGGTTTATGAGTTTATGCCGCGAGGAAGTTTGGAGAATCACCTCTTCAGAAGACCCTTGCCTCTACCATGGTCTATCAGAATGAAAATTGCACTCGGTGCTGCAAAAGGTCTCGCTTTTCTCCATGAAGGAGCTCAGAGACCTGTGATATATCGTGATTTTAAGACATCTAATATTCTATTAGATGCGGAATATAATTCGAAGCTTTCTGATTTTGGACTTGCGAAAGATGCTCCTGAGGGTGAAAAAACACATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCGGAATATGTGATGACTGGTCATCTGTCATCAAAAAGTGATGTCTACAGCTTCGGAGTTGTGCTGCTTGAAATGCTCACCGGTCGACGATCCATTGATAAGAAAAGACCAAATGGAGAGCACAATCTGGTGGAATGGGCAAGACCTGTACTTGGAGACAGGAGGTTGTTCTATCGAATCATCGATCCCCGCCTCGAAGGTCACTTTTCGGTTAAAGGAGCACAGAAAGCAGCACAACTAGCTGCTCAGTGCCTTAGTCGCGATCCAAAATCTAGACCTTTGATGAGTGAAATTGTCCATGCTTTAAAGCCTTTGCCAAACCTTAAGGATATGGCCATATCATCTCATCAATTCAAGATTGCACGCGTTGATCGTACCATGTCCATGCCTAATTCTAAAAACGGTATTAGAACTGATTTAGCATCTTTACCAAAGGGTCAGCCGAAAAGGACCATGTCGAGTTCAAATTATGGACATGGTTCTCCTTATCCTCGTCATGGCAAGTCTCCGAAACCTATTGTGTAA 1458 0.4088 MGFGNKNVIKAGSLEVDKSKVDVVKKERRCWFRFSCVGCCIPSRSKLDRSICCNGNTSTQNGDNTKSVIIQSEENKSTSETNTKESIGLVDSSTTTSNGESISSTSKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEGAQRPVIYRDFKTSNILLDAEYNSKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGDRRLFYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEIVHALKPLPNLKDMAISSHQFKIARVDRTMSMPNSKNGIRTDLASLPKGQPKRTMSSSNYGHGSPYPRHGKSPKPIV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0256 485 Gene3D Transferase(Phosphotransferase) domain 1 219 437 - -
Mtr6g0256 485 MobiDBLite consensus disorder prediction 73 103 - -
Mtr6g0256 485 PANTHER OS01G0588500 PROTEIN-RELATED 64 477 - -
Mtr6g0256 485 Pfam Protein kinase domain 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0256 485 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524
Mtr6g0256 485 PANTHER RECEPTOR-LIKE KINASE PLANT 64 477 - -
Mtr6g0256 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Mtr6g0256 485 ProSiteProfiles Protein kinase domain profile. 133 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0256 485 SUPERFAMILY Protein kinase-like (PK-like) 108 413 IPR011009 -
Mtr6g0256 485 PIRSF TyrPK_CSF1-R 233 342 - -
Mtr6g0256 485 PIRSF TyrPK_CSF1-R 366 473 - -
Mtr6g0256 485 PIRSF TyrPK_CSF1-R 132 235 - -
Mtr6g0256 485 PIRSF TyrPK_CSF1-R 10 125 - -
Mtr6g0256 485 MobiDBLite consensus disorder prediction 440 485 - -
Mtr6g0256 485 CDD STKc_IRAK 139 416 - -
Mtr6g0256 485 Gene3D Phosphorylase Kinase; domain 1 117 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0256 Mtr-Chr6 3093050 3097209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0256 85 425 Glycoside Hydrolase AT3G07070 51.585 2.02e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr6g0256 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0256 - - gmx:100499647 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0256 6 3093050 3097209 Mtr7g0123 7 2243656 2248417 PCT