LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0249	ATGAATATCAACAGAGGAGACACAAGCAAGGCTTGTGCATCTTGCAAATTCCAAAGAAGAAAGTGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACATATCGAAGATATTAAAGCAAGTTAAGGAAGAATATAGAGATGATGCAATGAAATCAATTATTATTGAGTCGGATATGCGTGCTCAATTCCCTGTTGGTGGATGTCTTGATGTTATTATGATGTATTATGGTATGATCAAGAACTCTGAGCTAGAACTAAATTCTGTTAAATTCTTACTAGATCATTGTAAGCAAAATCTTGAACCCTACTTATCAATTCATCATTCTTCTGCTCCGTCTAGTAGCACTCGAGTTCCGAATCCTTATTTTGATACCAAACAACACTTTGAAACTAATTCTATGGATGCAGCAAGGGTTACACAATTGATCAGTGGTGTTAGCAATGCAATGGAAGAAAAATCTAACTTGATGGTAACACAAGGACTATGCCATTGTGAAGAATTATTGGATCTTAATGGTAGTACAAAATTTGATTTAAGGGAAAAGGAGAAGTAG	609	0.3596	MNINRGDTSKACASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNISKILKQVKEEYRDDAMKSIIIESDMRAQFPVGGCLDVIMMYYGMIKNSELELNSVKFLLDHCKQNLEPYLSIHHSSAPSSSTRVPNPYFDTKQHFETNSMDAARVTQLISGVSNAMEEKSNLMVTQGLCHCEELLDLNGSTKFDLREKEK*	203

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g0249	202	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 27-RELATED	8	151	-	-
	Mtr6g0249	202	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	8	151	-	-
	Mtr6g0249	202	Pfam	Lateral organ boundaries (LOB) domain	11	107	IPR004883	-
	Mtr6g0249	202	ProSiteProfiles	LOB domain profile.	10	111	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0249	Mtr-Chr6	3019424	3020032	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0249	5	107	AS2 family	AT3G47870	53.398	5.53e-33	119

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Mtr6g0249		LOB	5.8e-33	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g0249	-		-	mtr:MTR_6g011230	401.364

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr6g0249	6	3019424	3020032	Mtr6g0249	6	3019424	3020032	ECH