Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0249 ATGAATATCAACAGAGGAGACACAAGCAAGGCTTGTGCATCTTGCAAATTCCAAAGAAGAAAGTGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACATATCGAAGATATTAAAGCAAGTTAAGGAAGAATATAGAGATGATGCAATGAAATCAATTATTATTGAGTCGGATATGCGTGCTCAATTCCCTGTTGGTGGATGTCTTGATGTTATTATGATGTATTATGGTATGATCAAGAACTCTGAGCTAGAACTAAATTCTGTTAAATTCTTACTAGATCATTGTAAGCAAAATCTTGAACCCTACTTATCAATTCATCATTCTTCTGCTCCGTCTAGTAGCACTCGAGTTCCGAATCCTTATTTTGATACCAAACAACACTTTGAAACTAATTCTATGGATGCAGCAAGGGTTACACAATTGATCAGTGGTGTTAGCAATGCAATGGAAGAAAAATCTAACTTGATGGTAACACAAGGACTATGCCATTGTGAAGAATTATTGGATCTTAATGGTAGTACAAAATTTGATTTAAGGGAAAAGGAGAAGTAG 609 0.3596 MNINRGDTSKACASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNISKILKQVKEEYRDDAMKSIIIESDMRAQFPVGGCLDVIMMYYGMIKNSELELNSVKFLLDHCKQNLEPYLSIHHSSAPSSSTRVPNPYFDTKQHFETNSMDAARVTQLISGVSNAMEEKSNLMVTQGLCHCEELLDLNGSTKFDLREKEK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0249 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 151 - -
Mtr6g0249 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 151 - -
Mtr6g0249 202 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Mtr6g0249 202 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0249 Mtr-Chr6 3019424 3020032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0249 5 107 AS2 family AT3G47870 53.398 5.53e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr6g0249 LOB 5.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0249 6 3019424 3020032 Mtr6g0249 6 3019424 3020032 ECH