Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr6g0217 | ATGAATACTTTTTGGTTGTGGTGGCAAATGTGTGGTGAAAAAAATGTTTCCATTAATGATAAGAAAAAGAAGAATGGTTCTTTGAAGTCCATTTTCATGCATGCTGATGTTCTTGATTGGTTTTTCATGGTTTTTGGTTTGATTGGTGCCATTGGTGATGGACTAATGACCCCTTTGCTTCTGCTTTTCTTAAGCAGACTTATGAACTCTATTGGTTCTAATTCTGGCCCATCAAAGAACTATTTTGTCCGTAGCATCAATGAGAATGCTGTTGTTTTGTTATATTTGGCATGTGCCTCTTGTGTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAGTTCTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACAAGTGTCTCAAACGACATCCTAGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCGAATTTTGTGATGAATACATCTATTTTCTTTGGAGGATACATAGTGGCATTTGCATTGTTATGGAGATTGGCAATTGTTGGGTTCCCTTTTGTGGTACTACTTGTGATTCCTGGTTTCATGTATGGAAGAACTATGATGGGATTGGCTAGAAAAATGAGAGAAGAGTACAATAAAGCAGGTACAATAGCAGAACAAGCAATATCTTCAATTAGAACTGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAGCTGCTTTCTCTAATGCTTTGGAAGGATCAGTGAAATTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGCATAGGAAGCAATGGTCTTCTTTTTGCTGTATGGTCTTTGATGGCCTATTATGGTAGCAGAATGGTCATGTATCATGGTGCTAAAGGTGGTACTGTATTTGCTGTTGGATATTCAATAGCACTTGGTGGATCGGCTTTAGGAGCTGGTCTATCAAATGTGAAGTACTTCTCAGAGGCAAGTGTTGCAGGAGAAAGAATAATGGAAATGATAAATAGAGTTCCAAAAATAGATTCTAAAAACATGGAAGGTGAAATTCTAGAGAAAGTGTCAGGGAAAGTTGAATTCAACCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGGTCCTAAATGATTTTTGTTTAAAGGTTCCATCAGGGAAAACGGTTGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTTGTATCACTTTTACAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCACAAATGGGTTTAGTAAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCTACATATGAAGAAATTGTGGATGCTGCTAAAGCTTCCAATGCTCATAATTTCATTTCATTGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGAGGAGTTCAAATGTCTGGGGGGCAAAAGCAAAGGATTTCCATTGCAAGAGCTATCATAAAAATGCCAAAAATTCTTTTGCTAGATGAAGCAACAAGTGCACTAGATTCTGAATCCGAAAGAGTTGTCCAAGAAGCTTTAGACAAAGCCACCGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATTCAAAATGCAGACATCATTGCGGTTGTTCAAAATGGTATGATCGCGGAAACAGGATCTCATGAAAGCCTCATGCAAAATGACAATTCTCTTTACGCCTCCCTTGTTCGTCTCCAGCAAACAAAAAAGGACCAAACCGATGACACCCCATCTATCATGAATAGAGATCACATGCAAAACATGAGTGGTTGTAGACTCGTGAGTCCATCTAACTCTTTCAACTCAACAACGCGAGGCAGTGATGATGTTTTTAATTATAACAATGTCGTTGAAGATGTTGTTACTAAATTTGTAGTTGATGATGATAATAGTAAAAACAAGAAGGTTGAGGTTCCTTCCTTTCAAAGGTTGTTGGCAATGAATGGACCAGAGTGGAAGCAAACATGCTTGGGCTGTATAAATGCGATTTTAGTCGGTGCAATTCAACCTGTGTTTTCATTTGGATTGGGGTCGGTTATATCGGTTTATTTTTTGGAGAACCATGATGAGATCAAGAAGCAAATTAGGATTTATGCACTTTGTTTTCTAGGGTTGGCTGTTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGATTAGAGAAAAGATGTTTTCTAAGATACTCACATTTGAAGTTGGTTGGTTTGATGAAGATCAAAATTCTACAGGTTCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGTCTCTAGTGATACAAACAATTTCAGCAGTGGTAATAGCATTCACAATGGGACTACTTATTGCATGGAGATTAGCCATTGTTATGATAGCAGTTCAACCAATTATCATATATTGTTTCTACACAAGGTTTGTCCTTCTTAAGAATATGTCAAACAAAGCCGTCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGAAATAATTCTCAAAATGCTTGAAAAATCTCAACAAGGCCCAAGTCATGAAAGTATTAGACAATCTTGGTATGCTGGCATTGGACTTGCATGTGCACAAAGTATCAAGTTATGTAGTTATGCTTTGAGCTTTTGGTATGGTGGGAAACTTGTGTTGCAAGGTTATATCTCAGCCAAGGCGTTATTTAAGACTTTTTTAATTTTGGTAAGTACCGGAAAAGTTATCGCTGATGCTGGTAGCATGACGAATGATCTTGCTAAAGGTTCTGATGCCATTGCGTCGGTTTTCACAATCCTTGATAGGTATACGAAAATCAAGCCTGATGAAATAGAAGGTCACAAAGCTATAAAGTTAATAGGAAAAATTGAATTTTGTGATGTATATTTTGCATATCCGTCTAGACCTAATGTGATGATTTTTCAAGGATTTTCGATTAAATTTGATGCTGGAAAATCGACAGCTCTGGTAGGGAAAAGTGGTTCTGGGAAATCAACGATCATAGGACTAATTGAGAGGTTCTATGATCCACTTGAAGGGATAGTGACAATTGATGGCAGAGACATAAAAACTTATAATCTAAGGTCATTAAGGAAACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTGGTGGTACCATAAAAGAAAATATTGCATATGGATCATATGGTGATCAGGTTGATGAGAGTGAAATTATAGAGGCATCAAAGGCTGCAAATGCTCATGATTTCATATCAAGCTTAAAAGATGGATATGACACATTGTGTGGTGACAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTAAAGAATCCAGATGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCTGAGAAATTAGTCCAAGACACTTTAGAAAAGGTCATGGTTGGAAGGACAAGCGTGGTTGTAGCACATAGGTTGAGTACTATCCAAAACTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAATGGAACACATTCATCCTTGTTGTCTAAAGGGCCAAGTGGAGCATATTACTCTTTGATAAGTCTACAAAAAAGACCAACCAACATAATTGTTGATTCTCCACATGAAATTAAATAA | 3825 | 0.377 | MNTFWLWWQMCGEKNVSINDKKKKNGSLKSIFMHADVLDWFFMVFGLIGAIGDGLMTPLLLLFLSRLMNSIGSNSGPSKNYFVRSINENAVVLLYLACASCVACFLEGYCWTRTGERQAARMRVRYLKAVLRQEVAYFDLHVTSTSEVITSVSNDILVIQDVLSEKVPNFVMNTSIFFGGYIVAFALLWRLAIVGFPFVVLLVIPGFMYGRTMMGLARKMREEYNKAGTIAEQAISSIRTVYSFAGESKTIAAFSNALEGSVKLGLKQGLAKGLGIGSNGLLFAVWSLMAYYGSRMVMYHGAKGGTVFAVGYSIALGGSALGAGLSNVKYFSEASVAGERIMEMINRVPKIDSKNMEGEILEKVSGKVEFNHVEFVYPSRPESVVLNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRISIARAIIKMPKILLLDEATSALDSESERVVQEALDKATVGRTTIIIAHRLSTIQNADIIAVVQNGMIAETGSHESLMQNDNSLYASLVRLQQTKKDQTDDTPSIMNRDHMQNMSGCRLVSPSNSFNSTTRGSDDVFNYNNVVEDVVTKFVVDDDNSKNKKVEVPSFQRLLAMNGPEWKQTCLGCINAILVGAIQPVFSFGLGSVISVYFLENHDEIKKQIRIYALCFLGLAVISMVVNVLQHYSFAYMGEYLTKRIREKMFSKILTFEVGWFDEDQNSTGSVCSRLAKEANVVRSLVGDRLSLVIQTISAVVIAFTMGLLIAWRLAIVMIAVQPIIIYCFYTRFVLLKNMSNKAVKAQDECSKIAAEAVSNLRTINAFSSQEIILKMLEKSQQGPSHESIRQSWYAGIGLACAQSIKLCSYALSFWYGGKLVLQGYISAKALFKTFLILVSTGKVIADAGSMTNDLAKGSDAIASVFTILDRYTKIKPDEIEGHKAIKLIGKIEFCDVYFAYPSRPNVMIFQGFSIKFDAGKSTALVGKSGSGKSTIIGLIERFYDPLEGIVTIDGRDIKTYNLRSLRKHIALVSQEPTLFGGTIKENIAYGSYGDQVDESEIIEASKAANAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPDVLLLDEATSALDSQSEKLVQDTLEKVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVENGTHSSLLSKGPSGAYYSLISLQKRPTNIIVDSPHEIK* | 1275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr6g0217 | 1274 | SUPERFAMILY | ABC transporter transmembrane region | 683 | 996 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0217 | 1274 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1018 | 1256 | IPR003439 | GO:0005524 | |
Mtr6g0217 | 1274 | Coils | Coil | 862 | 882 | - | - | |
Mtr6g0217 | 1274 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 28 | 1264 | IPR039421 | - | |
Mtr6g0217 | 1274 | ProSitePatterns | ABC transporters family signature. | 1159 | 1173 | IPR017871 | GO:0005524 | |
Mtr6g0217 | 1274 | SMART | AAA_5 | 395 | 587 | IPR003593 | - | |
Mtr6g0217 | 1274 | SMART | AAA_5 | 1045 | 1239 | IPR003593 | - | |
Mtr6g0217 | 1274 | Pfam | ABC transporter | 1037 | 1187 | IPR003439 | GO:0005524 | |
Mtr6g0217 | 1274 | Pfam | ABC transporter | 386 | 535 | IPR003439 | GO:0005524 | |
Mtr6g0217 | 1274 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 361 | 606 | IPR027417 | - | |
Mtr6g0217 | 1274 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1012 | 1259 | IPR027417 | - | |
Mtr6g0217 | 1274 | ProSitePatterns | ABC transporters family signature. | 507 | 521 | IPR017871 | GO:0005524 | |
Mtr6g0217 | 1274 | Gene3D | ABC transporter type 1, transmembrane domain | 31 | 628 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0217 | 1274 | Gene3D | ABC transporter type 1, transmembrane domain | 658 | 1006 | IPR036640 | GO:0005524|GO:0016021 | |
Mtr6g0217 | 1274 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 44 | 333 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0217 | 1274 | Pfam | ABC transporter transmembrane region | 44 | 309 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0217 | 1274 | Pfam | ABC transporter transmembrane region | 696 | 966 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0217 | 1274 | Gene3D | - | 1008 | 1265 | IPR027417 | - | |
Mtr6g0217 | 1274 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 368 | 604 | IPR003439 | GO:0005524 | |
Mtr6g0217 | 1274 | PANTHER | ABC TRANSPORTER B FAMILY PROTEIN | 28 | 1264 | - | - | |
Mtr6g0217 | 1274 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 702 | 983 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Mtr6g0217 | 1274 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 685 | 1001 | - | - | |
Mtr6g0217 | 1274 | CDD | ABC_MTABC3_MDL1_MDL2 | 1018 | 1259 | - | - | |
Mtr6g0217 | 1274 | Gene3D | - | 358 | 607 | IPR027417 | - | |
Mtr6g0217 | 1274 | CDD | ABC_MTABC3_MDL1_MDL2 | 368 | 606 | - | - | |
Mtr6g0217 | 1274 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 43 | 341 | - | - | |
Mtr6g0217 | 1274 | SUPERFAMILY | ABC transporter transmembrane region | 38 | 349 | IPR036640 | GO:0005524|GO:0016021 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr6g0217 | Mtr-Chr6 | 2540983 | 2550112 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr6g0217 | 27 | 1260 | Calmodulin-binding Proteins | AT2G36910 | 44.382 | 0.0 | 1047 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr6g0217 | K05658 | - | gmx:100807709 | 1895.17 |