Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0208 ATGACCCTAGACTTTACCTTCACCGTGGAATTGGAAAATACTGTCAAAAAAGACCGTGCTTCTATTTTGCTTGACTTTACAAGAATACAATATGGGGATATATACATCTCAGTAATAGCTAATTTGATGATAAATAACATAATGGATAGTATTAGTGCTACAAAGACAAACAATAAAATAAGTTTTGATTTGAATGAATATCCAATAGAAGATATTTTTATAGATAATGGTTCTTCAGAAATAATTAGTGAGCAACTTGATCATAATTTAGTGGAGAATGTTGAGAAAGAAAACTCCATTTTAAGTCTGAATAATGCAACAAATGAAGAAGTCGATAAAGACGGAACTGAGACAAATTGTGTTCCATTTGTTGGTCAAATTTTTCTTAGTGAAGAAGAAGCCTATGTCTTTTATAAGAGATATGCTTATCAACAAGGGTTCTCAATTAAAAAAGGTAGATTCGTAAAAAAGAATGGGGTTATTTGCAGACGTGATATTTTTTGTCATCGTGAAGGTAAAGCATCCTTGAAAATAATGGAACCATCAAAAGAGCAGAGAAATAGACAATCCTCAAAGTGTGAATGCAAAGCTCATTTACGAATCAAATTACAAAAATCTCATGATATGTTTCCAACTGAGTGGCGAGTCACATCGTTTATTGTCGAACACAACCATGGTTTGCTAACCCAAACAGAGGTGCGTTTTTTACCGGCTTATCGAATTATCTTAGAAGATGACCGTGAACGCATTTTCTTATTAAAAGAAGGTGGGCTTTCGGTTAGACAAATAATGCGGGTTATAGAACTAGAGAAAAATGTGAAGCATGGTTATCTTCCATATACTGAAAAGGACATTCGCAATCTTTATGTGAAAGCTAATAAAAAAATTGAAGGAAGTGATGTCATGGATCTTTTGAAGTATTGTGAGGGTGCAAAAAAAACTTCCTCTAAATTTCAATATGCTTATACACTTGATGAAGAAAGAAGGTTAGAGCATATTTTTTGGTCCTCGGCTTCTTGTTTTGATTGGTACCAAAAATACGGTGATGTTGTTGTGTTTGATACTACATACAAGGTTAATTCTTATGAAATGCCATTTGGGATTTTTGTGGGTATGAATAATCATGGAAAGACTGTACTTTTTGGATGTGCACTCTTACGAAACGAAACGGTGTATGCATTTCGTTGGCTAATGAAGACTTTTATATCTTTGATGAAGAAGCCACCAACGACTATACTAACCGATCAAGATCCATGGATGAAAGAAGCAATCTCAAAAGAGTTTCCATCGACAAAACATAGTTTCTGCATATGGCACATAACTTTCAAGTTTAGTTCTTGGTTTAATGCTCTACTTCGAGACAAATATGCTAAATGGTGTTCTGAATTTTATGAGTTGTATAAGTTAGAGACATGTGAAGAATTTGAGCATCAATGGCCAGAAGTTGTTGCTAAGTATAACTTGCAGTCAAATAAACATGTGAAAGGATTGTATGAAATCAGAAATTATTGGGCACTCGCGTATCTTCGTGATCATTTCTTTGGTGGAATGACAACCACAGGAAGATCGGAGAGTATTAATGCTTTCATTAAAAGATTCATCAATTCTCACACAAGTTTAACTGACTTTGCAAAGCAGGTTGATGTAGCAATTGATGATATTAAGCAAAAAGAAGACCACGATATAATGTTAGAGAAGTGCAAAGGATCAAATATGAAGTTGATGTCACCTTTACAAGAGCAAGCTCAATGTGTTCTCACTCGTTTTTCTTTTCAAAAGTTTCAAGAGGAGTTTGCGAGGTCCTCACAATATTCAATTGATCATGAAAATGGTAATGTGTTTGTCGTGCGGTTTTATAAAGATATTAATAGTAGGAAACATGTAGTGTTTTGGGATGGTAAGGTAGCTACATGTAGTTGCAAGCTCTTTGAATTTTGGGGGATATTATGTCGTCATATTCTTAGTATTTTTCTTCATAAAGATTGTCATGAAATCCCTTCTAACTACTTGCCTTCACGGTGGTTGCTTCAAGCATCATACGATGATAATGATGTGGAGTCTCAAGTTAATGTTGTTGGTGAGGAGCAAGTACTAGATTGTAACAATGAACCTCAACCACAACATGTTGTTCATTGTCCTCCAAAATCCAAACCTAAAGGTCGTCCCAAACGACGACGACTTAAAGGTGGAAAAGAGCTATCACATAATATGAACACTTGTGGATTATGCAGAGGTTTAGGACATAACATTGCCACATGCCCACTTAAGGAAAAGAAAAAGGCAAACAAAAAAAAGAAAATTTGTGACGATTCAAATTTAAATCCAATTCTCCTTCCAAAAGTTTAG 2346 0.3465 MTLDFTFTVELENTVKKDRASILLDFTRIQYGDIYISVIANLMINNIMDSISATKTNNKISFDLNEYPIEDIFIDNGSSEIISEQLDHNLVENVEKENSILSLNNATNEEVDKDGTETNCVPFVGQIFLSEEEAYVFYKRYAYQQGFSIKKGRFVKKNGVICRRDIFCHREGKASLKIMEPSKEQRNRQSSKCECKAHLRIKLQKSHDMFPTEWRVTSFIVEHNHGLLTQTEVRFLPAYRIILEDDRERIFLLKEGGLSVRQIMRVIELEKNVKHGYLPYTEKDIRNLYVKANKKIEGSDVMDLLKYCEGAKKTSSKFQYAYTLDEERRLEHIFWSSASCFDWYQKYGDVVVFDTTYKVNSYEMPFGIFVGMNNHGKTVLFGCALLRNETVYAFRWLMKTFISLMKKPPTTILTDQDPWMKEAISKEFPSTKHSFCIWHITFKFSSWFNALLRDKYAKWCSEFYELYKLETCEEFEHQWPEVVAKYNLQSNKHVKGLYEIRNYWALAYLRDHFFGGMTTTGRSESINAFIKRFINSHTSLTDFAKQVDVAIDDIKQKEDHDIMLEKCKGSNMKLMSPLQEQAQCVLTRFSFQKFQEEFARSSQYSIDHENGNVFVVRFYKDINSRKHVVFWDGKVATCSCKLFEFWGILCRHILSIFLHKDCHEIPSNYLPSRWLLQASYDDNDVESQVNVVGEEQVLDCNNEPQPQHVVHCPPKSKPKGRPKRRRLKGGKELSHNMNTCGLCRGLGHNIATCPLKEKKKANKKKKICDDSNLNPILLPKV* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0208 781 Pfam MULE transposase domain 350 441 IPR018289 -
Mtr6g0208 781 Pfam FAR1 DNA-binding domain 137 228 IPR004330 -
Mtr6g0208 781 SMART 26again6 636 663 IPR006564 GO:0008270
Mtr6g0208 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 671 739 IPR031052 GO:0006355
Mtr6g0208 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 670 IPR031052 GO:0006355
Mtr6g0208 781 MobiDBLite consensus disorder prediction 709 730 - -
Mtr6g0208 781 ProSiteProfiles Zinc finger SWIM-type profile. 614 661 IPR007527 GO:0008270
Mtr6g0208 781 Pfam SWIM zinc finger 628 660 IPR007527 GO:0008270
Mtr6g0208 781 MobiDBLite consensus disorder prediction 714 730 - -
Mtr6g0208 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 671 739 - -
Mtr6g0208 781 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 63 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0208 Mtr-Chr6 2406254 2409359 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g0208 MULE 3.6e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0208 - - gsj:114409893 1191.41