Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0203 ATGGGTGGTGGTGATCAGAAAAATGTTTCCATTAATGATAAGAAAAAGAAAAATGGTTCTTTCAAGTCCATTTTCATGCATGCTGATGTTCTTGATTGGTTTTTCATGGCTTTTGGTTTTTTTGGGGCTATTGGTGATGGCATGATGGTCCCTTTCGTGTTGTTTATCACAAGCAAAATTATGAACTCTGTTGGTAGTGCTTCTGGAACATCAAGCAGCAATTTTGTCCATGATGTCAATAAGAATGCAGTTGTTGTGCTATACATGGCCTGTGCTTCTTTTTTTGTATGCTTCCTAGAGGGCTATTGTTGGACAAGAACAGGTGAAAGACAAGCTGCAAGAATGAGAGTTAGGTACTTAAAAGCAGTTCTAAGACAAGAAGTATCATACTTTGATTTGCATGTTACAAGCACAACAGATGTCATCACCAGTGTATCTAGTGACAGCCTAGTAATTCAAGATGTTCTTAGTGACAAGGTTCCAAATTTTTTGGTGAATGCATCTAGGTTCCTTTCAAGCAACATAGTAGCATTTGCATTATTATGGAGATTGGCTATTGTTGGATTCCCTTTTATGGTTCTTCTTGTGATCCCTGGTTACATGTATAAGAGGATTTCGATGAGGTTGGCTAGAAAGATTAGAGAAGAGTACAATCAAGCTGGTACAATAGCGGAACAAGCAATATCTTCTATAAGAACTGTTTATTCTTTTGTAGGGGAAAGCAAAACTCTAGCAGCTTTCTCTAATGCTTTGGAAGGGTCAGTGAAATTAGGTTTGAAACAAGGTTTGGCTAAAGGCTTAGCCATAGGAAGCAATGGTGTTGTCTATGCTATATGGTCTTTAATATTCTACTATGGTAGCATAATGGTCATGTATCATGGTGCTAAAGGCGGTACAGTATTTGTAGTTGGAGTAACATTAGCAATTGGTGGATTGGCTTTTGGAACTTGTTTCTCAAATGTGAGGTACTTCGCAGAAGCAAGTGTGGCAGGAGAAAGAATAATGGAAGTGATAAAAAGAGTTCCAACGATAGATTCTGAAAACATGGAAGGTGAAATTATAGAGAAAGTCTTGGGGGAAGTTGAGTTCAACAATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGATCTTAAATGATTTTTGCTTAAAGGTTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACGGTTGTATCACTTTTACAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAACTTAAGTGGCTTAGGTCACAAATGGGTTTAGTAAGTCAAGAACCTGCTTTGTTTGCAACAAGCATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCTACATATGAAGAAATTGTGGATGCTGCCAAAGCTTCCAATGCTCATAATTTCATATCAATGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAATTCAAATGTCTGGGGGACAAAAGCAAAGGATTGCCATTGCAAGAGCCATAGTAAAAATGCCAAAAATTCTATTGCTAGACGAAGCAACAAGTGCTCTCGATTCTGAATCTGAACGAGTTGTCCAAGAAGCTCTAGACAAAGCTGTAGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCCACCATCCAAAATGCAGACATCATTGCAGTTGTTCAAAATGGTAAGATCATGGAAACAGGATCTCACGAAAGCCTCATGCAAAATGACAGTTCCATTTACACATCCCTAGTTCATCTCCAACACACCAAAAATGACCAAGACGGTGATACCCTATCTATCATGAATAAACATCACATTAGTTGTAGATTTTTGAGTCGTTCTAGCTCTTTCAACTCAATGACACATGGTGGTGGTGATGTCGTTAATTATAACAATGTTGTTGAAGATGTTGTTAACGACATTGATCATAATACTAATAAGAAGAAGAAAAAGGTGAAGGTTCCTTCATTTCGAAGATTGTTGGCAATGAATGCTCCAGAATGGAAGCAAGTATGTTTGGGGTGTTTGAGTTCAGTTTTATTCGGTGCGGTTCAACCTATATCCACATTTGCAACGGGGGCAGTTGCATCGGTTTATTTTCTGAATGACCGTGATGAGATGAAGAAGCAGATTAGGATGTATGCTTTTTGTTTTCTAGGGTTGGCTTTGGCCTCTATTGTTTTCAATATGCTTGAACAGTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGATTAGAGAAAGAATGTTTTCCAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAGGATCAAAATTCTACGGGTGTTATTTGCTCTAGACTTGCCAAAGAAGCCAACGTGGTAAGATCTGTGGTGGGTGATAGTTTGTCACTAGTGGTACAAACTATATCAGCAATGGTAGTAACATGTACAATGGGTCTAATTATTACATGGAGACTATCCATTGTTATGATATCAGTTCAACCAATTACCATTTTTTGTTACTACACAAGACGTGTTCTTCTTAATAACATGTCAAGTAAAGCCATTAAGGCTCAAGATGACAGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAATCATCACATCTTTTTCATCACAAAATAGAATCCTCAAAATGCTTGAAAAAGCCCAACAAGGCCCACGTCATGAAAGTATCAGACAATCTTGGTATGCGGGTATTGGACTTGCATGTTCACAAAGCCTCATTTTTTGTACTAGAGCCTTAAACTTTTGGTATGGTGGAAAACTTGTCTCACAAGGATATATAACAAAAAATCAATTTTTTGAGACAATTATGATTTGGATAAGCATTGGAAAAGTTATTGCAGATGCTGCGAGTAGCATGACTAATGATCTTGCTAAAGGTTCTGATGCCGTCAGATCAGTTTTTGCAATTCTTGATAGGTATACGAAAATTAAGTCGGACGACTTAGAAGGTTTCAGAGCTGAAAAGTTGATAGGAAAAATTGTATTTCATGACGTACATTTTTCATATCCGGCTAGGCCTAATGTGATGGTCTTTCAAGGGTTCTCTATTGAAATTGACGCCGGAAAATCAACGGCTTTGGTTGGGGAAAGTGGTTCTGGAAAATCGACAATCATAGGACTAATTGAGAGATTCTATGATCCACTTAAAGGGATAGTGACAGTTGATGGTAGAGACATAAAAACTTATAATCTACGATCATTAAGGAAACATATTGCACTTGTGAGTCAAGAACCAACATTGTTTGGTGGTACCATAAGAGAAAATATTGTATATGGAGCATATGATGATAAAGTTGATGAGAGTGAGATTATAGAGGCATCAAAGGCTGCAAATGCTCACGATTTCATATCAAGCTTAAAAGATGGTTATGATACACTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTCCAAGATGCTTTAGAAAAGGTCATGGTTGGAAGGACAAGCGTGGTTGTAGCACATAGGTTGAGTACTATTCAAAACTGTGATTTGATTGCTGTTTTGGATAAGGGAATTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGGGCCAAGTGGAGCATATTACTCTTTGGTAAGTCTACAAAGAAGACCAAACAATATAATTGCTGATTCTTGCCATGAAATTAACTAA 3792 0.3782 MGGGDQKNVSINDKKKKNGSFKSIFMHADVLDWFFMAFGFFGAIGDGMMVPFVLFITSKIMNSVGSASGTSSSNFVHDVNKNAVVVLYMACASFFVCFLEGYCWTRTGERQAARMRVRYLKAVLRQEVSYFDLHVTSTTDVITSVSSDSLVIQDVLSDKVPNFLVNASRFLSSNIVAFALLWRLAIVGFPFMVLLVIPGYMYKRISMRLARKIREEYNQAGTIAEQAISSIRTVYSFVGESKTLAAFSNALEGSVKLGLKQGLAKGLAIGSNGVVYAIWSLIFYYGSIMVMYHGAKGGTVFVVGVTLAIGGLAFGTCFSNVRYFAEASVAGERIMEVIKRVPTIDSENMEGEIIEKVLGEVEFNNVEFVYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATYEEIVDAAKASNAHNFISMLPQGYDTQVGERGIQMSGGQKQRIAIARAIVKMPKILLLDEATSALDSESERVVQEALDKAVVGRTTIIIAHRLSTIQNADIIAVVQNGKIMETGSHESLMQNDSSIYTSLVHLQHTKNDQDGDTLSIMNKHHISCRFLSRSSSFNSMTHGGGDVVNYNNVVEDVVNDIDHNTNKKKKKVKVPSFRRLLAMNAPEWKQVCLGCLSSVLFGAVQPISTFATGAVASVYFLNDRDEMKKQIRMYAFCFLGLALASIVFNMLEQYSFAYMGEYLTKRIRERMFSKILTFEVGWFDEDQNSTGVICSRLAKEANVVRSVVGDSLSLVVQTISAMVVTCTMGLIITWRLSIVMISVQPITIFCYYTRRVLLNNMSSKAIKAQDDSSKIAAEAVSNLRIITSFSSQNRILKMLEKAQQGPRHESIRQSWYAGIGLACSQSLIFCTRALNFWYGGKLVSQGYITKNQFFETIMIWISIGKVIADAASSMTNDLAKGSDAVRSVFAILDRYTKIKSDDLEGFRAEKLIGKIVFHDVHFSYPARPNVMVFQGFSIEIDAGKSTALVGESGSGKSTIIGLIERFYDPLKGIVTVDGRDIKTYNLRSLRKHIALVSQEPTLFGGTIRENIVYGAYDDKVDESEIIEASKAANAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALEKVMVGRTSVVVAHRLSTIQNCDLIAVLDKGIVVEKGTHSSLLSKGPSGAYYSLVSLQRRPNNIIADSCHEIN* 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0203 1263 CDD ABC_6TM_Pgp_ABCB1_D2_like 673 990 - -
Mtr6g0203 1263 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Mtr6g0203 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1248 IPR027417 -
Mtr6g0203 1263 ProSitePatterns ABC transporters family signature. 1148 1162 IPR017871 GO:0005524
Mtr6g0203 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 599 IPR027417 -
Mtr6g0203 1263 Gene3D - 997 1256 IPR027417 -
Mtr6g0203 1263 Gene3D - 359 631 IPR027417 -
Mtr6g0203 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0203 1263 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524
Mtr6g0203 1263 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 334 - -
Mtr6g0203 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 685 941 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0203 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1007 1245 IPR003439 GO:0005524
Mtr6g0203 1263 CDD ABC_MTABC3_MDL1_MDL2 1007 1248 - -
Mtr6g0203 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Mtr6g0203 1263 SMART AAA_5 388 580 IPR003593 -
Mtr6g0203 1263 SMART AAA_5 1034 1228 IPR003593 -
Mtr6g0203 1263 Gene3D ABC transporter type 1, transmembrane domain 85 981 IPR036640 GO:0005524|GO:0016021
Mtr6g0203 1263 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Mtr6g0203 1263 Pfam ABC transporter 1026 1176 IPR003439 GO:0005524
Mtr6g0203 1263 SUPERFAMILY ABC transporter transmembrane region 670 985 IPR036640 GO:0005524|GO:0016021
Mtr6g0203 1263 SUPERFAMILY ABC transporter transmembrane region 31 342 IPR036640 GO:0005524|GO:0016021
Mtr6g0203 1263 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 21 1253 - -
Mtr6g0203 1263 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 1253 IPR039421 -
Mtr6g0203 1263 Pfam ABC transporter transmembrane region 683 950 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g0203 1263 Pfam ABC transporter transmembrane region 37 303 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0203 Mtr-Chr6 2354978 2366843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0203 20 1249 Calmodulin-binding Proteins AT2G36910 43.775 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0203 K05658 - gmx:100807709 1847.79