Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0198 ATGATAATAATAGTTTTCATTTGCATAATAATTGTTTTCATGCTACAAACTCAAATCTTCTATCCATCCCCACTAGGCCATCGGAGCTTTTCCTTACCTAATAAAATGGATTTGGTTCTTGATTTCCTATCTAGTGTCACTTCAGTAGCACTCTTTTCAATATTCTTGTTTTCTTTTTTGTTTCTTTATCGTTCCTACAAAGTTTCCCATAGCAAAGAGGCTCCTATAGTTCAAGGGGCATGGCCAATACTTGGTCACCTCCCACTATTAAGATCTTCACAATCACCTCATAGAACCTTAGGTGCATTGGCTGATAAATATGGACCCTTGTTCACTATTAAGCTTGGTTCCAAACGTGCTTTGGTTGTTAGCAATTGGGAAATGGCAAAGGAATGTTTCACAAAAATTGACTTGGCAATATCCAATCGCCCTAAACTTGAAGCAACTCAACATTTGGGTTACAATGGTGCCATGTTTGCGTTAGCACCCTATGGTTCTTGTTGGCGCCAAGTAAGGAAGATTGCAACTTCAGAGATCCTCAGCCATAGGCATGTCGAACAACAACAATATTTTCATACCTCAGAAGTTCAGGCGTGGATTAAAGAGCTCTTCAATGTTTGGTTTAGTAAAAAGAACGAGTCATCAAACTACGCGTTGGTGGAGTTAAAGCAATGGTTTACTCAATTAAGTTTCAACATTGTTCTTCCAGTGCTGGTTGGGAAACGATATTTTGGTGCTACGAATGTGGCGAACGAGGAAGAAGCGCAAAGATGTATAAAAGCTTTACAAGAGTTGATGCGATTGTTAGGGGTGTTCACAATAGGAGATGCCATTCCTTTTCTAAAATGGTTTGATTTTGGTGGCCATGTGAAGGCCATGAAAGCAACTTCTAAAGAATTGGACAAGATTTTAGGTGAGTTGTTGGAAGAGCGCCGCCATAAAAGGAGTTTGAGTAAGAAGATTGATCATGATCATCAAGACTTCATGGATGCCTTGCTTTCATTGCTTGATGAAACACCAATTGAAGGGTGTGATTCTGATACTACAATCAAAGCGACAATATTGACACTAATCGGGGGAGGAATTGAAACAACTAGCGTTACCCTTACATGGGCAATATGTTTGTTGCTTAGAAATCCTCTAATATTGAAAAAAGCAAAAGAAGAACTTGATGCTCAAGTTGGAAAAGAGAGGTGTGTAAGAAAGTCAGATATAGACAAGTTGGTGTACCTTCAAGCCATAGTCAAAGAAACACTAAGATTATATCCACCTGGCCCTTTATCTGTGCCTCGTGAATTCTCAGAGAATTGTAATTTAGGTGGATATGATGTAAGAAATGGAACACGATTAATTTTGAATCTTTGGAAGATTCACACTGATCCTAATGTTTGGTCAGATCCATTAGTATTCAAACCGGAGAGGTTTCTTACAACGCATAAAGATATTGATTTTAGAGGTAATCATTTTGAGCTATTACCATTTGGAGGTGGTAGAAGGATTTGTCCCGGAATATCATTAGGGCTTCAAATGCTGCATTTAACTTTGGCTAGTTTTTTGCATTCCTTTGAAATCTTAAATCCATCAAGTGAACCTATTGATATGAATGAAACTTTTGGATTAAGCAACACCAAAACAACTCCTCTTGAGATTCTTATAAAGCCACGTTTGTCTTCGAATTGTTATGAAATTATGTGA 1695 0.3794 MIIIVFICIIIVFMLQTQIFYPSPLGHRSFSLPNKMDLVLDFLSSVTSVALFSIFLFSFLFLYRSYKVSHSKEAPIVQGAWPILGHLPLLRSSQSPHRTLGALADKYGPLFTIKLGSKRALVVSNWEMAKECFTKIDLAISNRPKLEATQHLGYNGAMFALAPYGSCWRQVRKIATSEILSHRHVEQQQYFHTSEVQAWIKELFNVWFSKKNESSNYALVELKQWFTQLSFNIVLPVLVGKRYFGATNVANEEEAQRCIKALQELMRLLGVFTIGDAIPFLKWFDFGGHVKAMKATSKELDKILGELLEERRHKRSLSKKIDHDHQDFMDALLSLLDETPIEGCDSDTTIKATILTLIGGGIETTSVTLTWAICLLLRNPLILKKAKEELDAQVGKERCVRKSDIDKLVYLQAIVKETLRLYPPGPLSVPREFSENCNLGGYDVRNGTRLILNLWKIHTDPNVWSDPLVFKPERFLTTHKDIDFRGNHFELLPFGGGRRICPGISLGLQMLHLTLASFLHSFEILNPSSEPIDMNETFGLSNTKTTPLEILIKPRLSSNCYEIM* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0198 564 Pfam Cytochrome P450 79 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 Gene3D Cytochrome P450 62 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 SUPERFAMILY Cytochrome P450 80 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 494 503 IPR017972 GO:0005506|GO:0016705
Mtr6g0198 564 PANTHER CYTOCHROME P450 82A2 36 562 - -
Mtr6g0198 564 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS P450 superfamily signature 492 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PANTHER CYTOCHROME P450 82C3-RELATED 36 562 - -
Mtr6g0198 564 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 128 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 349 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 453 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 491 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0198 564 PRINTS E-class P450 group I signature 501 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0198 Mtr-Chr6 2286851 2289448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0198 49 561 Cytochrome P450 AT4G31940 47.519 9.15e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0198 - - gmx:100803451 712.605