Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0197 ATGGATTTAGATTTAAGCAGTTTAATAAACGCCACAACAATTGCACTCCTAATTTCTCTAATTCCCCTATGTTTATTTCTATTTGGACTCTCAAAATTTTCTCACAGCAAAAACAAAGAAGCACCCATAGCTAAAGGTGCATGGCCAATACTTGGTCACCTCCCAATTTTTAGTGGCAAACAACCACCCCACAGAGTTTTAGGTCCATTAGCTGATAAATATGGACCAATATTCACTATCAAGCTTGGTTCTAAACATGCTTTAATACTTAACAATTGGGAAATTGCCAAGGAATGTTTCACTACACACGACATGGTTGTTTCGTCTCGTCCCAAGCTCATTTCAACCGAACACTTAGCCTATGGAGGAGCCGTATTTGGCTTTGGACCTTATGGTCCTTATTGGCGTGAACTTCGCAAAATTGTAACCTTAGAGATCCTCACCAATCGTCGAATTATTCAACAACAACATGTTCGTGTTTCTGAAGTTCAAACATCAATTAAAGAGCTCTTCGATGTTTGGTATAGCAAAAAGAAAGAGTCATATCCGTCAAACTATATGTTGGTGGATTTGAAGCAATGGTTTACACACCTAACATTTAATATGGTTCTTCGAATGGCTGTTGGGAAGAGATATTTCGGTGCAAAAACTATTGTTGAAGAAGCTCAAAGAAGTGTGAAAGCTTTGAAGGAGATTATGCGTTTGTTCGGGGTAATCACGGTGGGAGATGTTATTCCTTGTTTAAAATGGTTTGATTTTGGTGGTCATATGAAGGCCATGGATGAAACTTCTACGGAAATGGACGAAATTTTAGGTGAGTGGTTGAAGGAGCATCGCCATAAAAGGACTTTGACTGAAAAGGCTGATGATCAAGATCAAGACATCATGGATGTGTTAATTTCATTGCTTGATGGAAAAACCATGGAAGGGTTTGATTGTGATACCATAATCAAAGCAACAATATTGACATTATTTATCGGAGGAAGTGACACAAGTAGTGTTACTCTTACATGGGCAATATGTTTACTATTGAAAAATCCTCTTGTATTGAAAAAAGCAAAAGAAGAACTTGACACTCACGTTGGCAAAGAAAGGCTTGTAAACGAGTCGGATATTGGTAAGTTGGTATACCTTCAAGCTATAGTAAAAGAAACCCTAAGATTGCATCCACCAGGTCCTCTCGCCGCACCTCGTGAATTCTCAGAGAATTGCACTATTGGTGGTTACCATGTTAGAAAAGGAACTCGGTTAATGCTAAATCTTTGGAAGATTCAAACTGATCCTAGTGTTTGGTCAGATCCATTAGAGTTCAAACCAGAAAGGTTTCTTACCACTCATAAAGTTGTTGATGTTAGAGGTAATCATTTTGAACTACTACCATTTGGAAGTGGTAGAAGGAAGTGTCCTGCAATATCTTTTGGACTTCAAATTGTGCATTTCACTCTAGCAAGTTTTTTGCATTCCTTTGATATCTTAAATCCAACACCCGGACTTGTTGATATGACTGAAGAATTTGGATTAGCAAACACCAAAGCTACTCCACTTGAGATTCTCATTAAACCACACCTGTCTCTCAATTGTTATGAAATGTTGTGA 1596 0.3803 MDLDLSSLINATTIALLISLIPLCLFLFGLSKFSHSKNKEAPIAKGAWPILGHLPIFSGKQPPHRVLGPLADKYGPIFTIKLGSKHALILNNWEIAKECFTTHDMVVSSRPKLISTEHLAYGGAVFGFGPYGPYWRELRKIVTLEILTNRRIIQQQHVRVSEVQTSIKELFDVWYSKKKESYPSNYMLVDLKQWFTHLTFNMVLRMAVGKRYFGAKTIVEEAQRSVKALKEIMRLFGVITVGDVIPCLKWFDFGGHMKAMDETSTEMDEILGEWLKEHRHKRTLTEKADDQDQDIMDVLISLLDGKTMEGFDCDTIIKATILTLFIGGSDTSSVTLTWAICLLLKNPLVLKKAKEELDTHVGKERLVNESDIGKLVYLQAIVKETLRLHPPGPLAAPREFSENCTIGGYHVRKGTRLMLNLWKIQTDPSVWSDPLEFKPERFLTTHKVVDVRGNHFELLPFGSGRRKCPAISFGLQIVHFTLASFLHSFDILNPTPGLVDMTEEFGLANTKATPLEILIKPHLSLNCYEML* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0197 531 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 PANTHER CYTOCHROME P450 82A2 1 529 - -
Mtr6g0197 531 PANTHER CYTOCHROME P450 82C3-RELATED 1 529 - -
Mtr6g0197 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Mtr6g0197 531 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 SUPERFAMILY Cytochrome P450 47 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0197 531 Pfam Cytochrome P450 47 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0197 Mtr-Chr6 2274597 2277955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0197 15 523 Cytochrome P450 AT4G31940 47.885 8.01e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0197 - - gmx:100805047 725.702