Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0187 ATGGCATCTGGTGGAACAGAAGCTTTTCCAGACTTAGGTAAACATTGCCAGCATGTTGATTGTCACCAGCTTGATTTCCTTCCTTTCACATGTGATGGCTGCAAACAGGTATTTTGTGTGGAACATAGATCCTATAAGTCACATGAATGTCCAAAACCAGACCACAACAGCAGAAAAGTGGTTGTTTGCGAAGAATGTTCCATGTCTATGGAGATCAGAGGCAACATGGGAGAAAACGAAGAGGCAATCTTAAAGAAACACCGCAGTTCAGGGAAGTGTGACCCTAGCAAGAAGAAGAAACCGACTTGCCCTGTGAAGCGTTGCAAGGAGATTTTGACGTTTTCTAACACAAGTACTTGTAAAACTTGCCACATTAAGGTGTGTCTCAAGCACCGATTTTCTGCTGATCATGCTTGCAGTAAAGGAGATTCATCTTCTTTAACAACTACTGCTGGAAATGGAAGGTGGAATAATAGGTTTATGGCTGCTTTGGCTTCAAGAAATGGTCAAGATTGTGGCAAAAAATCTGGATCTCGTTCTACTACTTCTCCTCCTAGTAATCCTTCTGTTAAGGCTTGTTGA 582 0.421 MASGGTEAFPDLGKHCQHVDCHQLDFLPFTCDGCKQVFCVEHRSYKSHECPKPDHNSRKVVVCEECSMSMEIRGNMGENEEAILKKHRSSGKCDPSKKKKPTCPVKRCKEILTFSNTSTCKTCHIKVCLKHRFSADHACSKGDSSSLTTTAGNGRWNNRFMAALASRNGQDCGKKSGSRSTTSPPSNPSVKAC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0187 193 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 176 - -
Mtr6g0187 193 SUPERFAMILY AN1-like Zinc finger 94 141 IPR035896 -
Mtr6g0187 193 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Mtr6g0187 193 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Mtr6g0187 193 MobiDBLite consensus disorder prediction 168 193 - -
Mtr6g0187 193 Gene3D - 79 155 IPR035896 -
Mtr6g0187 193 MobiDBLite consensus disorder prediction 171 193 - -
Mtr6g0187 193 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Mtr6g0187 193 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Mtr6g0187 193 Gene3D - 2 67 IPR035896 -
Mtr6g0187 193 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Mtr6g0187 193 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Mtr6g0187 193 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Mtr6g0187 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0187 Mtr-Chr6 2149303 2150864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0187 1 172 C2H2 Transcription Factor Family AT3G28210 62.791 1.91e-76 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0187 - - aprc:113867149 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0187 6 2149303 2150864 Mtr6g0187 6 2149303 2150864 ECH