Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0183 ATGGCTATGCCACAATCATCTTCCTCCTCTTCTTCATCCTCCTCCAAATTCACCTATAACGTGTTCCTAAGTTTCAGAGGAGCTGACACTCGCCATGGTTTTACCGGCAATCTTTACGATGCTCTATGTAAAAGTGGAGTCCACACTTTCAAGGATGACGAGGAGCTTCAACGAGGGGGTGAAATAACAGCATCACTTATGAAAGCCATTGAAGAGTCCAGAATTTTCATCCCTGTTTTCTCAAAGAACTATGCTTCTTCTTCATTTTGTTTGGACGAACTTGTCCACATCATTCGTTACTCCAAGTCAAAGGGACGCCTGGTTCTACCAGTTTTCTATGATATTGCTCCTACTCATGTACGAAAGCAGACTGGGAGCATCGGTGAAGAACTTGCGAAGCATCAAGAGAAGTTCCAAAAGAATATGGAAAGGCTGCAGGAATGGAAGATGGCTCTTAAAGAAGCAGCTGAGCTTTCCGGCCACCACTTCAATCTTGCGGGACGACCTGACATTCGCGATGGTTTTACCGGCAATCTTTACGATGCTCTACGTAAAAGTGGAGTCCACACTTTCATGGATGACGAAGAGCTTCAACGAGGGGGTGAAATAACACCATCGCTTGTGAAAGCCATTGAAGAATCCAGAATTTTCATCCCTGTTTTCTCAAAGGACTATGCTTCTTCTTCATTTTGTTTGGACGAACTTGTCCATATCATTCGTTGCTCCAAGTCAAAGGGACGCCCGGTTCTGCCAGTTTTCTGTAACATAGATCCTAATCATGTACGAAATCAGACTGGGAGCATCGGTGAAGAACTGGCAAAGCATCAAGAGAAGTTCCAAAAGAATATGAAAAGGCTGCGGGAATGGAAGAAAGCTCTTAAACAAGCAGCTGATCTTTCCGGCTACCACTTCGATCTTGCTGGGACTGAATATGAATCCAATTTTATTCAAGGCATAGTTAAAGAGGTCTCCCGCAGGATCGATCGTGTACCTCTACATGTTACAGAGTTCCCTGTTGGCCTGGAATCTCAAGTACTAAAAGTAAAGTCACTTATGGACGTTGGATGCCATGATGGTGCCCAGATGATTGGGATCCATGGGATTGGCGGAATAGGCAAAACAACACTTGCAAAAGAGATTTATAATCGGATTTATGATCAATTTGACAAGGTGTGTTTCCTACATGACGTGAGAGAAATTTGTTCGACTAAATATGGCTTAGTACATCTCCAGGAGCAACTCCTCTTCCAAACAGTTGGGCTAAACGATAAGCTAGGACATGTCAGTGAGGGAATTCAATTCATAAAGGAAAGACTACAACAGAAGAAGGTTTTGTTGATTCTTGATGATGTTGACCAACCAGACCAGCTGAAGGCTTTGGCTGGAGATCTTAATTGGTTTTGCGGTGGTAGCAAGGTGATCGTTACCACCCGAGATAAACATTTGTTAGCAAGTTATGGGGTTGAAAAAACATATGAAGTGAATGGGTTAAATGAGAAAGATGCACTTGACTTGTTGAGGTGGAAGGTTTGTAAAAGTAACAAAATTGGTTCCAGTTATGAGGGCATTTTAGAACATGCATCAAGATATTCCTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCTGACTTGTCTGGAAAGTCTAAAGACGAATGGAGTTCTACATTGGCTCGATATGAAAGGACTGTTCCTAAAAACATCCAACAGATACTTAAAGTCAGCTTTGATGCTTTGCAGGAGGAAGATAAGAGTCTCTTTCTCGACATTGCTTGTTTTTTCAAAGGATGTAGACTGGAAGAGTTCCAAGATATACTTGATGCTCATTATACTTATTGCATCAAAAATCATATTGGAGTGTTGGTTGAAAAATCACTCATAAAGATTATTGGGGGTTGTGTGACATTACATGACTTGATAGAGGAAATGGGTAAAGAAATCGTACGACAAGAATCACCAAAAGAGCCTGGAAAACGTAGTAGGTTGTGGTCCCATGAAGATATAGTTCCTGTTTTACATGCAAATTCGGGAACAAGAAAAATTGAAATATTATACCTGAATTTCTCATTGTCTAAAGAAGAAGAGGTAGAATGGAAAGGAGATGAATTGAAGAAGATGGAAAATCTTAGAACAATTATCATCCGAAATTGCCCCTTTTCCAAAGGTTGTCAACATCTTCCAAATGGTTTGAGAGTGCTGGATTGGCCTAAATACCCTTCAGAGAATTTACCATCTGATTTTTTTCCAAGGAAACTTTCCATATGCAGGTTACGTGAAAGTAGCCTTACAACATTTGAGTTTCCTAGCTCATCCAAAAAGTTCTTGTGCATGAGAGAGTTAAATTTAGACCACAATCAATCTTTAACACAGATACTTGACATATCTGGTCTCTTAAATTTGGAAATACTGTCATTTCGAGATTGTTCGAATTTAATTACAATTCACAATTCGATTGGGTTTTTGAATAAACTCAAAATCTTGAACGTTACTGGCTGCAGCAAGCTGAGTAGTTTTCCACCCATAAAGTTGACATCTCTTCTAAAACTTGAACTTTCACATTGTAATAATCTCAAGAGTTTTCCAGAAATATTAGGAGATATGAAACATATAACATACATTGAATTGGTTGGTACTTCCATAGAACAATTTCCATTTTCCTTTCAAAATCTCTCCATGGTCCATACTTTACAAATATTTGGAAGTGGAAAGCCTCATAATTTGTCTTGGATTAATGCTCGTGAAAATGATATACCGAGCTCCACGGTGTATTCAAATGTTCAATTTCTTCATCTCATAGAATGCAATCCATCAAATGATTTTCTTCGAAGGTTTGTCAATGTGGAAGTTTTAGACCTATCGGGAAGTAATCTCACCGTTCTTTCAAAATGCCTCAAAGAGTGTCACTTTTTACAAAGACTTTGTTTGAATGATTGCAAGTATCTCCAAGAAATTACAGGGATTCCGCCAAGTTTAAAACGTTTGTCTGCATTACAATGCAATTCACTGACTTCCTCATGTAGAAGCATGCTACTTAGTCAGCATTTGCATGAAGATGGAGGCACCGAGTTTAGTTTGGCAGGAAGTGCTAGGGTTCCAGAGTGGTTTGATCACCAAAGCGAGGGACCATCAATTTCTTTTTGGTTTCGTGGCAGGTTCCCTTCCATAGCTCTCTTCGTTGCTAGTCTATCAACGGATAACAGGCATCCCAACAGTGATTTTCTTTCATTAACAGCCCATCTGAGAACCTATACCGATGGTATTGAGTTTGACATCAACAGTGTCGATCTCAATCTCGTGATACAACCAGATCATACATATCTATATGATCTGCGACAGCAAGTGATGGAACTCGAATCTGACCTGGAGAAAACAGATTTAATAGATGAATGGATCCATGCAGAGATTACGTTTAAGTGTGAGGGCGGCAGAGAGGAAGAATTGTTTATAGAAAGTGGAGTTCACGTATTCAAGCTGAAAACTAGTATGGAGGATATTCGATTTACCAATCCGCATAATTGA 3519 0.3987 MAMPQSSSSSSSSSSKFTYNVFLSFRGADTRHGFTGNLYDALCKSGVHTFKDDEELQRGGEITASLMKAIEESRIFIPVFSKNYASSSFCLDELVHIIRYSKSKGRLVLPVFYDIAPTHVRKQTGSIGEELAKHQEKFQKNMERLQEWKMALKEAAELSGHHFNLAGRPDIRDGFTGNLYDALRKSGVHTFMDDEELQRGGEITPSLVKAIEESRIFIPVFSKDYASSSFCLDELVHIIRCSKSKGRPVLPVFCNIDPNHVRNQTGSIGEELAKHQEKFQKNMKRLREWKKALKQAADLSGYHFDLAGTEYESNFIQGIVKEVSRRIDRVPLHVTEFPVGLESQVLKVKSLMDVGCHDGAQMIGIHGIGGIGKTTLAKEIYNRIYDQFDKVCFLHDVREICSTKYGLVHLQEQLLFQTVGLNDKLGHVSEGIQFIKERLQQKKVLLILDDVDQPDQLKALAGDLNWFCGGSKVIVTTRDKHLLASYGVEKTYEVNGLNEKDALDLLRWKVCKSNKIGSSYEGILEHASRYSSGLPLALEVVGSDLSGKSKDEWSSTLARYERTVPKNIQQILKVSFDALQEEDKSLFLDIACFFKGCRLEEFQDILDAHYTYCIKNHIGVLVEKSLIKIIGGCVTLHDLIEEMGKEIVRQESPKEPGKRSRLWSHEDIVPVLHANSGTRKIEILYLNFSLSKEEEVEWKGDELKKMENLRTIIIRNCPFSKGCQHLPNGLRVLDWPKYPSENLPSDFFPRKLSICRLRESSLTTFEFPSSSKKFLCMRELNLDHNQSLTQILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLSSFPPIKLTSLLKLELSHCNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVHTLQIFGSGKPHNLSWINARENDIPSSTVYSNVQFLHLIECNPSNDFLRRFVNVEVLDLSGSNLTVLSKCLKECHFLQRLCLNDCKYLQEITGIPPSLKRLSALQCNSLTSSCRSMLLSQHLHEDGGTEFSLAGSARVPEWFDHQSEGPSISFWFRGRFPSIALFVASLSTDNRHPNSDFLSLTAHLRTYTDGIEFDINSVDLNLVIQPDHTYLYDLRQQVMELESDLEKTDLIDEWIHAEITFKCEGGREEELFIESGVHVFKLKTSMEDIRFTNPHN* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0183 1172 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Mtr6g0183 1172 SUPERFAMILY Toll/Interleukin receptor TIR domain 170 302 IPR035897 -
Mtr6g0183 1172 SMART AAA_5 359 497 IPR003593 -
Mtr6g0183 1172 Gene3D - 496 580 IPR042197 -
Mtr6g0183 1172 SMART till_3 18 158 IPR000157 GO:0007165
Mtr6g0183 1172 SMART till_3 160 299 IPR000157 GO:0007165
Mtr6g0183 1172 Gene3D Ribonuclease Inhibitor 678 866 IPR032675 -
Mtr6g0183 1172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 164 IPR044974 GO:0006952
Mtr6g0183 1172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 171 1137 IPR044974 GO:0006952
Mtr6g0183 1172 ProSiteProfiles TIR domain profile. 179 327 IPR000157 GO:0007165
Mtr6g0183 1172 Gene3D Ribonuclease Inhibitor 867 1011 IPR032675 -
Mtr6g0183 1172 Pfam NB-ARC domain 347 571 IPR002182 GO:0043531
Mtr6g0183 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 327 590 IPR027417 -
Mtr6g0183 1172 SUPERFAMILY L domain-like 649 1008 - -
Mtr6g0183 1172 Pfam TIR domain 19 154 IPR000157 GO:0007165
Mtr6g0183 1172 Pfam TIR domain 169 325 IPR000157 GO:0007165
Mtr6g0183 1172 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Mtr6g0183 1172 Gene3D - 168 324 IPR035897 -
Mtr6g0183 1172 Gene3D - 325 490 IPR027417 -
Mtr6g0183 1172 Gene3D - 11 167 IPR035897 -
Mtr6g0183 1172 PRINTS Disease resistance protein signature 362 377 - -
Mtr6g0183 1172 PRINTS Disease resistance protein signature 438 452 - -
Mtr6g0183 1172 PRINTS Disease resistance protein signature 531 545 - -
Mtr6g0183 1172 PRINTS Disease resistance protein signature 841 857 - -
Mtr6g0183 1172 SUPERFAMILY "Winged helix" DNA-binding domain 567 672 IPR036390 -
Mtr6g0183 1172 PANTHER ARCHAEAL ATPASE 29 164 - -
Mtr6g0183 1172 PANTHER ARCHAEAL ATPASE 171 1137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0183 Mtr-Chr6 2104687 2110301 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0183 167 907 WRKY Transcription Factor Family AT4G12020 29.373 2.62e-70 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0183 - - mtr:MTR_6g008140 2330.83