Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0160 ATGTCTTCATCCCCAGAAGGCTACGCAATCGAACTCTACATGGATCCAGCACTCGAAAACCAAGTTCTCAAATCCTGGAACGTCCTCGCTCGCCGTCAAATCAGCACCTCCTTAATCACCACCGCCTCCCGTCCTCACATCACTCTCTTCTCCACCACTTCTCTTCTCGATCCTCTCAAACTCGAACCTCTCCTCAAAACCCTAACAACAACAACCTCCCCTTTCCCTCTCTCCTTCTCATCAATCTCGTCGTTCTCTAACGATAACAACACTCTCTTTCTCTCTCCTACTCCTTCTCTCGCTCTTCTCAATTTTCACTCGAATTTGATTGATTCCATTCTTAAGGAAAATGTTGTTGATGTTGGTGATGAGTTTTGTGTTGGGAATTGGATTCCGTCTTGTGAAGTTGCGAAAAATGTTAGTAAAGGGAGAATGACGGAAGCGTTTTCGATTTTGAGGGAGATTAAATTGCCTGTTAATGGTTATGCTGTTGATGTTGCTCTTGTTAGCTTTAATCCTGTTCAAGAAGTTTTCTCCTTTGTGCTTGGTAATCATGGTAATAATAATGTCAATGAGAATTGA 582 0.4278 MSSSPEGYAIELYMDPALENQVLKSWNVLARRQISTSLITTASRPHITLFSTTSLLDPLKLEPLLKTLTTTTSPFPLSFSSISSFSNDNNTLFLSPTPSLALLNFHSNLIDSILKENVVDVGDEFCVGNWIPSCEVAKNVSKGRMTEAFSILREIKLPVNGYAVDVALVSFNPVQEVFSFVLGNHGNNNVNEN* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0160 193 Pfam 2'-5' RNA ligase superfamily 40 160 - -
Mtr6g0160 193 PANTHER - 6 185 - -
Mtr6g0160 193 Gene3D Cyclic phosphodiesterase 8 184 - -
Mtr6g0160 193 SUPERFAMILY LigT-like 6 114 IPR009097 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0160 6 184 Calmodulin-binding Proteins AT5G40190 62.570 4.49e-73 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0160 - - mtr:MTR_6g007773 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0160 6 1889318 1890321 Mtr6g0160 6 1889318 1890321 ECH