Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0152 ATGAGAAGAAGATGGTCCTTTTACAAGGATGTTTTGCCACCTGTGGTGATCATAGGACAGGAAACTATTGAAATGGCTTTACTCACTTTGTTCAAAGCAGCCACACTTCAAGGGATGAACAATCATGTCTTTGTTGCCTATGCTTATGCTATTGGTACTGCTATTCTCCTTCCTATCACTTTTTTTAGAAGAAGATTGCTTCCACCACTAAGTTTCTCCACAATATTGAAAAGTGTGCTTCTTGGAGCAATAGGATGTTCAGCTCAGATTTTGGGGTATATTGGTATTAACTACAGTTCTCCAACACTTGCTTCAGCAATTGGTAATCTGGTACCTGCTTTCACTTTCATTCTAGCTGTCATTTTCAGGATGGAAAAGTTAGCTGCAAAGAGTAGAAGTAGCAATGCAAAGGTAGTAGGAAGCATAATATCAATAGCAGGTGCTTTTGTGATGACTTTCTACAAAGGACCGTCGATCATGAATTCTTCATCACTTCATCAACCAGCTGGCTTTCTCATGGCAGTGGATTCAAGTTGGGCGATTGGTGGCATTCTGCTAACAATTGACTTCTTTCTGCTATCGCTACGCTACATTTTTCAGGTGCATATCTTGAAAGAGTTCCCTGACGAAGTAACTTTAGTCTTGTTATACACCATTACTGCCACCATCATATCAACAGTTGTAGCATTGTTATCAGTTCCAAATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTCATCTCCATTGTTTCTTCTGGCATATTTGGGAAATTTATCAGCAGTACAGCTATTGCATGGTCATTGAACATGAAGGGGGCTGTCTATGTAACCTCATTCAAGCCTCTACAAATTGTTATTTCTGTTGGCTTAGGAGTTATATTCCTTGGTGATATTCTTCATATTGGAAGTATAATTGGAGCCACAATAATCACAATTGGTCTTTATGCTGTATTATGGGGCAAAGCAACAGAAAAGATAGAGGAAGATGTTGGTAGCCTAGAGTCACCATCTATAGAGAATGCACCTCTTTTACAAAGTTATAGAACTGAAACATTTGAAAAGAAAACAAATGGAAATATTTAA 1086 0.384 MRRRWSFYKDVLPPVVIIGQETIEMALLTLFKAATLQGMNNHVFVAYAYAIGTAILLPITFFRRRLLPPLSFSTILKSVLLGAIGCSAQILGYIGINYSSPTLASAIGNLVPAFTFILAVIFRMEKLAAKSRSSNAKVVGSIISIAGAFVMTFYKGPSIMNSSSLHQPAGFLMAVDSSWAIGGILLTIDFFLLSLRYIFQVHILKEFPDEVTLVLLYTITATIISTVVALLSVPNASAWKIGLNLSLISIVSSGIFGKFISSTAIAWSLNMKGAVYVTSFKPLQIVISVGLGVIFLGDILHIGSIIGATIITIGLYAVLWGKATEKIEEDVGSLESPSIENAPLLQSYRTETFEKKTNGNI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0152 361 Pfam EamA-like transporter family 26 152 IPR000620 GO:0016020|GO:0016021
Mtr6g0152 361 PANTHER WAT1-RELATED PROTEIN 5 348 IPR030184 GO:0016021|GO:0022857
Mtr6g0152 361 PANTHER WAT1-RELATED PROTEIN 5 348 - -
Mtr6g0152 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 322 - -
Mtr6g0152 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0152 Mtr-Chr6 1796035 1799580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0152 1 351 Nodulin-like Gene Family AT3G28050 47.283 4.96e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0152 - - mtr:MTR_6g007740 519.235