Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0143 ATGATCAAGTTTGTAACAAGCAAATTCATGACCATTTCTATAATTATTCTTCTTCAACAAAACTTGGTATTTTCAAAATGTAGCTGTGAAAATCAAGTAGAAGATTCTTATCATAAAGTATCTGAGGCATTGAAATATAAATTAATTGCTATGGCAACAGTTTTTGTTTCTAGTCTAATTGGTGTATGCATTCCAATCTTTGCAAAAAAATGTTCATATTTAAATCCGGAAAATGATTTTTATTTTTTGGTTAAAGCGTTTGCTGCTGGTGTGATTCTAGCGACCGGGTTCATACACATACTTCCAGATGCTTTCGAAGCCTTAACGAGTCCTTGTATAAGCGAAAAGCCATGGAAATTGTTTCCTTTCTCAGGTTTTGTTACAATGGTAGCAGCCATTGGAACTTTAATTATGGAAGCTTTGATTATGGGCTACCATAAAAGATCTGAAATGAAAAAAGCTCAGCCTTTGGATGAGAATGATGAGACTCATCATTCAGATAATGGTAGTAGTCATGTTCATAATTTTTCAATTGCATCAGATAGATTAGATTCAACAAATCGCCTCCGGTATACTATAGTTTCTCAGATTTTGGAGCTAGGCATTGTGTTACATTCAGTCATTTTAGGGATATCTCTTGGGGTGTCAAGAAGTCCTAAAACAATCAAACCATTGGTGGCAGTATTAACTTTTCATCAATGCTTTGAAGGAATAGGACTTGGTGGCTGCATTTCTCAGGCACAATTCAAATACTATAAGGTTACAATTATGATACTATTCTTTTGCCTGATTTTTCCAATTGGAATTGGCATTGGTATGGGAATATCAAACATCTACAATGAAAGTAGTCCAAAGTCACTAATAGTTGAAGGATTTCTTCTATCAGCATCTGCAGGGGTTCTCATTAACATGGCACTTGTTGATCTTGTTGCAACTGACTTCATGAACTCAAAAATGCTAACCAATTTTAGGCTACAACTCGGGGCAAGTTTAGCACTTTTTGTGGGGATGATTTGTATGTCAATTTTGGCATTGGGGGAAGATTCCTAG 1050 0.3533 MIKFVTSKFMTISIIILLQQNLVFSKCSCENQVEDSYHKVSEALKYKLIAMATVFVSSLIGVCIPIFAKKCSYLNPENDFYFLVKAFAAGVILATGFIHILPDAFEALTSPCISEKPWKLFPFSGFVTMVAAIGTLIMEALIMGYHKRSEMKKAQPLDENDETHHSDNGSSHVHNFSIASDRLDSTNRLRYTIVSQILELGIVLHSVILGISLGVSRSPKTIKPLVAVLTFHQCFEGIGLGGCISQAQFKYYKVTIMILFFCLIFPIGIGIGMGISNIYNESSPKSLIVEGFLLSASAGVLINMALVDLVATDFMNSKMLTNFRLQLGASLALFVGMICMSILALGEDS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0143 349 PANTHER ZINC/IRON TRANSPORTER 16 345 - -
Mtr6g0143 349 MobiDBLite consensus disorder prediction 153 173 - -
Mtr6g0143 349 Pfam ZIP Zinc transporter 45 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Mtr6g0143 349 PANTHER ZINC TRANSPORTER 5-LIKE 16 345 - -
Mtr6g0143 349 MobiDBLite consensus disorder prediction 153 169 - -
Mtr6g0143 349 TIGRFAM zip: ZIP zinc/iron transport family 29 345 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0143 Mtr-Chr6 1687523 1690026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0143 4 345 Inorganic Solute Cotransporters AT3G12750 44.699 7.89e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0143 K14709 - jre:108984890 410.223