LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g0107	ATGGAGCGAATTTCAGAAAAACGATATCCTCTCAGTGCAAAAGATTACAAGTTATATGAAGAAGTTGGGGAAGGCGTTAGTGCCTCGGTATACCGGGCTCTCTGCATTCCACTCAATGAGATTGTTGCCATCAAAGTTCTTGATCTCGAGAAGTGCAATAACGATTTGGATGGAATTCGGAGAGAGGTGCAGACCATGAGCTTGATTGATCATCCAAATCTTTTACGGGCACATTGTTCTTTTACCGCTGGGCACAGTCTTTGGGTTGTGATGCCATTCATGTCTGGTGGCTCTTGCCTTCATATAATGAAATCTTCCTTTCCTGAGGGTTTTGATGAACCTGTTATTGCAACTGTATTACGCGAGGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATGCTAATGGTTCAGTCAAAATGGCTGACTTTGGAGTGTCTGCGTGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCGCCTATGAAAGTTTTGCTTATGACTTTGCAGAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTGCGACCGAATATCTATCTCGCACCATTCTCGATGGCCTTGCTCCATTAGGAGATCGTTTTAGACAGCTGAAGGCTAAAGAGGCAGATTTATTAATGCAAAACAAGGCTCTTTATGAGGATATGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCATGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATCCAAGATGAAGACATGTCAAATGCAGAAGAGCCAGATATGGCTAAGAAGAATGAAGACACATCAAATGACTTAAAGGTTCCCGTGGAGAACCTTTCTGCCTCTAATCATTCAGATGGTACATCCACACTGGACAAAGAGGATGGATTCAACAATCTTCAGGATTTGGAAAGTTCACTTGCTTCATTTCCTATGAAACCTCTTCAAGCACTCAAAGGCTGTTTCGATGTTGGTGACGATGATGGCAATAATACTAGCCCAAGAGATTTGGATCACAGCTATGGAAGGAATGACAATGAAAGTGCTGGGCCAAGTAATTTGTCACCTCAAAATGCTCAGCCTAATAAGTTTTTGAGTGGCTCTTTACAATCTGATAATTTTGCCAAAAAGGTTACCGATGGGGACAGGGATTATTTACAAACAAAATATCCTTCCGAGCGTAATCACAGTGGTCCATTATATCGGCAGAGGAGAGAAATCAACAACTTTCCATCGGTTGATGACACATCAGAAGGAGCAATTGTCCAGCGCAGGGGGCGGTTTAAGGTCACATCTGCAGATCCCAGTTCAATGGGTCTTTCAAACAACACTTCTGGCCCAGTTGCTGTAAGTCCTACTCCTACAAGTCCCCCAAATCAGAACTCAATGGCTGCTTCTATCCTTCCATCACTGCAGTGCATCTTGCAACAGAACGGCTTGCAAAGGGAAGAAATTGTTAAATTGATAAAGTATGCAGAGCAATCTTATGGTAAGAATACAGAATCAATAGAGGCAGGAGCATCTGATGCTTTGCAGGCATCACCTGTGTCGACTAGAGAGAAAGAACTGCATTTGCAAGTGATTCAACTCCAACAGAGCATTGGGAGTCTTGTCGAGGAACTGCAGAGACAAAAGCTGAAAAATGTTCAGTTAGAGAGACAGTTGAGCAGTATGGTCAACAAAGTTGAAAAGTGA	2004	0.4192	MERISEKRYPLSAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHSLWVVMPFMSGGSCLHIMKSSFPEGFDEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDANGSVKMADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARATEYLSRTILDGLAPLGDRFRQLKAKEADLLMQNKALYEDMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDEDMSNAEEPDMAKKNEDTSNDLKVPVENLSASNHSDGTSTLDKEDGFNNLQDLESSLASFPMKPLQALKGCFDVGDDDGNNTSPRDLDHSYGRNDNESAGPSNLSPQNAQPNKFLSGSLQSDNFAKKVTDGDRDYLQTKYPSERNHSGPLYRQRREINNFPSVDDTSEGAIVQRRGRFKVTSADPSSMGLSNNTSGPVAVSPTPTSPPNQNSMAASILPSLQCILQQNGLQREEIVKLIKYAEQSYGKNTESIEAGASDALQASPVSTREKELHLQVIQLQQSIGSLVEELQRQKLKNVQLERQLSSMVNKVEK*	668

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr6g0107	667	SMART	serkin_6	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr6g0107	667	SUPERFAMILY	Protein kinase-like (PK-like)	14	278	IPR011009	-
Mtr6g0107	667	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	1	664	-	-
Mtr6g0107	667	MobiDBLite	consensus disorder prediction	432	446	-	-
Mtr6g0107	667	MobiDBLite	consensus disorder prediction	448	478	-	-
Mtr6g0107	667	ProSiteProfiles	Protein kinase domain profile.	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr6g0107	667	Coils	Coil	637	664	-	-
Mtr6g0107	667	Gene3D	Phosphorylase Kinase; domain 1	5	93	-	-
Mtr6g0107	667	MobiDBLite	consensus disorder prediction	427	566	-	-
Mtr6g0107	667	MobiDBLite	consensus disorder prediction	479	493	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g0107	Mtr-Chr6	1232137	1241274	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g0107	1	664	MAP Kinase Kinase Kinase Kinase	AT5G14720	64.431	0.0	892

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Mtr6g0107		Pkinase	9.7e-58	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g0107	K08835		-	gmx:100784402	1063.91

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr6g0107	6	1232137	1241274	Mtr6g0107	6	1232137	1241274	ECH

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