Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0107 ATGGAGCGAATTTCAGAAAAACGATATCCTCTCAGTGCAAAAGATTACAAGTTATATGAAGAAGTTGGGGAAGGCGTTAGTGCCTCGGTATACCGGGCTCTCTGCATTCCACTCAATGAGATTGTTGCCATCAAAGTTCTTGATCTCGAGAAGTGCAATAACGATTTGGATGGAATTCGGAGAGAGGTGCAGACCATGAGCTTGATTGATCATCCAAATCTTTTACGGGCACATTGTTCTTTTACCGCTGGGCACAGTCTTTGGGTTGTGATGCCATTCATGTCTGGTGGCTCTTGCCTTCATATAATGAAATCTTCCTTTCCTGAGGGTTTTGATGAACCTGTTATTGCAACTGTATTACGCGAGGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATGCTAATGGTTCAGTCAAAATGGCTGACTTTGGAGTGTCTGCGTGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCGCCTATGAAAGTTTTGCTTATGACTTTGCAGAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTGCGACCGAATATCTATCTCGCACCATTCTCGATGGCCTTGCTCCATTAGGAGATCGTTTTAGACAGCTGAAGGCTAAAGAGGCAGATTTATTAATGCAAAACAAGGCTCTTTATGAGGATATGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCATGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATCCAAGATGAAGACATGTCAAATGCAGAAGAGCCAGATATGGCTAAGAAGAATGAAGACACATCAAATGACTTAAAGGTTCCCGTGGAGAACCTTTCTGCCTCTAATCATTCAGATGGTACATCCACACTGGACAAAGAGGATGGATTCAACAATCTTCAGGATTTGGAAAGTTCACTTGCTTCATTTCCTATGAAACCTCTTCAAGCACTCAAAGGCTGTTTCGATGTTGGTGACGATGATGGCAATAATACTAGCCCAAGAGATTTGGATCACAGCTATGGAAGGAATGACAATGAAAGTGCTGGGCCAAGTAATTTGTCACCTCAAAATGCTCAGCCTAATAAGTTTTTGAGTGGCTCTTTACAATCTGATAATTTTGCCAAAAAGGTTACCGATGGGGACAGGGATTATTTACAAACAAAATATCCTTCCGAGCGTAATCACAGTGGTCCATTATATCGGCAGAGGAGAGAAATCAACAACTTTCCATCGGTTGATGACACATCAGAAGGAGCAATTGTCCAGCGCAGGGGGCGGTTTAAGGTCACATCTGCAGATCCCAGTTCAATGGGTCTTTCAAACAACACTTCTGGCCCAGTTGCTGTAAGTCCTACTCCTACAAGTCCCCCAAATCAGAACTCAATGGCTGCTTCTATCCTTCCATCACTGCAGTGCATCTTGCAACAGAACGGCTTGCAAAGGGAAGAAATTGTTAAATTGATAAAGTATGCAGAGCAATCTTATGGTAAGAATACAGAATCAATAGAGGCAGGAGCATCTGATGCTTTGCAGGCATCACCTGTGTCGACTAGAGAGAAAGAACTGCATTTGCAAGTGATTCAACTCCAACAGAGCATTGGGAGTCTTGTCGAGGAACTGCAGAGACAAAAGCTGAAAAATGTTCAGTTAGAGAGACAGTTGAGCAGTATGGTCAACAAAGTTGAAAAGTGA 2004 0.4192 MERISEKRYPLSAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHSLWVVMPFMSGGSCLHIMKSSFPEGFDEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDANGSVKMADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARATEYLSRTILDGLAPLGDRFRQLKAKEADLLMQNKALYEDMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDEDMSNAEEPDMAKKNEDTSNDLKVPVENLSASNHSDGTSTLDKEDGFNNLQDLESSLASFPMKPLQALKGCFDVGDDDGNNTSPRDLDHSYGRNDNESAGPSNLSPQNAQPNKFLSGSLQSDNFAKKVTDGDRDYLQTKYPSERNHSGPLYRQRREINNFPSVDDTSEGAIVQRRGRFKVTSADPSSMGLSNNTSGPVAVSPTPTSPPNQNSMAASILPSLQCILQQNGLQREEIVKLIKYAEQSYGKNTESIEAGASDALQASPVSTREKELHLQVIQLQQSIGSLVEELQRQKLKNVQLERQLSSMVNKVEK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0107 667 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0107 667 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Mtr6g0107 667 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 664 - -
Mtr6g0107 667 MobiDBLite consensus disorder prediction 432 446 - -
Mtr6g0107 667 MobiDBLite consensus disorder prediction 448 478 - -
Mtr6g0107 667 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0107 667 Coils Coil 637 664 - -
Mtr6g0107 667 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Mtr6g0107 667 MobiDBLite consensus disorder prediction 427 566 - -
Mtr6g0107 667 MobiDBLite consensus disorder prediction 479 493 - -
Mtr6g0107 667 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0107 667 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 664 - -
Mtr6g0107 667 CDD STKc_OSR1_SPAK 14 277 - -
Mtr6g0107 667 MobiDBLite consensus disorder prediction 537 566 - -
Mtr6g0107 667 Gene3D Transferase(Phosphotransferase) domain 1 97 330 - -
Mtr6g0107 667 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0107 Mtr-Chr6 1232137 1241274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0107 1 664 MAP Kinase Kinase Kinase Kinase AT5G14720 64.431 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mtr6g0107 Pkinase 9.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0107 K08835 - gmx:100784402 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0107 6 1232137 1241274 Mtr6g0107 6 1232137 1241274 ECH