Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0092 ATGGATAAAAAACCATGCAACTCATCTCAAGATCCTGAAGTGAGAAAAGGGCCATGGACCATGGAAGAAGACTTGATTTTAATCAATTATATTGCAAATCATGGTGAAGGTGTTTGGAATTCCTTAGCCAAAGCTGCTGGTCTTAAACGTACAGGAAAAAGTTGCAGGCTTCGATGGTTAAACTACCTTCGTCCAGATGTTAGAAGAGGGAATATTACACCTGAGGAACAACTTTTGATCATGGAACTTCATGCAAAGTGGGGAAATAGGTGGTCCAAAATTGCAAAGCATCTTCCAGGAAGAACTGACAATGAGATTAAGAATTTTTGGAGGACTAGGATACAAAAGCACATTAAGCAAGTTGATCATCCTCACCAAAATAATTTCCAACAAATGAGTTTAGAGATAAATGATCATCATCAATCAAGTAGTAGCCAAGTTTCCAACATTGTAGAGCCAATGGAATCTTACTCTCCACCTTCATACCAAGGAACTTTGGAGCCATTTCCAGCTCAATTTCCAACAATCAATGATCATCATCCCTCAAGTTGTTGTACAAATGACAACAATAACAACAATTATTGGAGCATGGAGGATATCTGGTCAATGCAATTACTCAATGGAGATTAA 630 0.3794 MDKKPCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQVDHPHQNNFQQMSLEINDHHQSSSSQVSNIVEPMESYSPPSYQGTLEPFPAQFPTINDHHPSSCCTNDNNNNNYWSMEDIWSMQLLNGD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0092 209 SMART sant 68 116 IPR001005 -
Mtr6g0092 209 SMART sant 15 65 IPR001005 -
Mtr6g0092 209 Gene3D - 73 146 - -
Mtr6g0092 209 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Mtr6g0092 209 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mtr6g0092 209 CDD SANT 73 112 IPR001005 -
Mtr6g0092 209 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 206 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mtr6g0092 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mtr6g0092 209 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mtr6g0092 209 CDD SANT 18 63 IPR001005 -
Mtr6g0092 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mtr6g0092 209 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mtr6g0092 209 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 206 - -
Mtr6g0092 209 Gene3D - 16 68 - -
Mtr6g0092 209 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0092 Mtr-Chr6 984837 989045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0092 4 209 MYB Transcription Factor Family AT3G01530 59.524 9.81e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr6g0092 Myb_DNA-binding 7.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0092 K09422 - gmx:778048 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0092 6 984837 989045 Mtr6g0092 6 984837 989045 ECH