Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0091 ATGGATCCTCTTACCCTAAAAAAGATGAAGTCCCTTGCGATTGATGTGGAGACTACTTCCCAAGAGAAATATAAATCGACTTTCTCAGATGTCAATTTGACCTCTAATGCTATCCATGACATACTCTTCGTTCACAAAGAAGGCACACTAAAAGGAGAGAAGCCTTATATGCTTATGCAAATTTTACATATTGTAAATTTCCCGATAACCGAAGGACTATGTAACAAACCTCATTTACTCTTATGGGATGGTCAAAATGCACACTATGCCTTGTTGAGTGTATCGCTCTCAAGAACATACCTTCGAGAAGGGTACCGTGTTGGGTCAATTGTAAGGTTGATGCAGTATTGTTGCAGAACTTTGGACAGTGGAGACAAAATTATCGTTGTTCTTAAAATGAACATGATGAAGGCCGATGCCATGGTCGTAGGAGACCCCCCAAACGCAGAGGACATCCGTTTACCTAACTATTCTTTTTCTCGTCCTCCCATTCCTCTGAAACGACGACTTTCTCCGATTCTAGGTGGCTATCAATTGGAATATGGTGAAAGCAGCAACACAAGAAGTGATGATCAATATTCTTTCAAAAAAATGAAAATAAGGAGGTGCAGGTCAATATGA 621 0.401 MDPLTLKKMKSLAIDVETTSQEKYKSTFSDVNLTSNAIHDILFVHKEGTLKGEKPYMLMQILHIVNFPITEGLCNKPHLLLWDGQNAHYALLSVSLSRTYLREGYRVGSIVRLMQYCCRTLDSGDKIIVVLKMNMMKADAMVVGDPPNAEDIRLPNYSFSRPPIPLKRRLSPILGGYQLEYGESSNTRSDDQYSFKKMKIRRCRSI* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0091 206 Pfam Replication factor-A protein 1, N-terminal domain 33 137 IPR007199 GO:0003677|GO:0005634|GO:0006260
Mtr6g0091 206 SUPERFAMILY Nucleic acid-binding proteins 32 142 IPR012340 -
Mtr6g0091 206 Gene3D - 31 150 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0091 79 146 Core DNA Replication Machinery Family AT2G06510 33.824 5.91e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0091 K22762 - mtr:MTR_6g006000 417.542