Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0082 ATGCAACAAACAACTATGTCTCCTTATTTTCTCTCATCAAACCTCAACATGCACAATCTCTATGTCTCACCTTCTTCTTCAACCTTACATCTTTCAAACCACATAACCAAACCAAAATTTCACCCTTTTCAAAATTCTCATTCTCACAATTTTTCTTCTTCACCACTTAGACTCACCATTGATGGATTTGCATGTCCATCTTCTTCTTTCTTCCAAACTGTTGGAAAATCTTCACCTTTCTTCATTTCAAATCCAAAAATGGATTCTTTTAGAGTCTTTGCTGCTTCTTCTGTACCTGAGGCACAGAGTGATGAAGGGAAACAAACTTCTGGGCTTGTTCAGTCTCTTCAGCTTGGTTTCATGTTTGCTACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGTATTTCAATTTGGCTTTGCTTCGTTGGTGAGCAATTTGATATGGACTTTGAATCTTCATCCCAGACCAAAAATTAGTAGATCACAGCTTACGGCAATCCTTCCACTTGCCGTGGCTCATACATTAGGGAACCTTTTGACGAACATTAGTCTTGGCAAGGTTGCCGTATCTTTCACTCACACCATCAAATCTATGGAACCTTTCTTCACTGTTGTACTTTCATCCCTTCTTCTGGGTGAGATGCCTACTTTATGGGTGGTTTCTTCTCTTCTACCTATAGTTGGGGGAGTGGCATTGGCATCGATGACTGAAGTCTCTTTCAATTGGATTGGATTCGGCACTGCAATGGCATCCAACCTTACGAATCAATCGCGGAATGTTTTGAGCAAAAAACTAATGGCTAATGAAGAGGAAGCTTTGGACAATATCAATCTCTACTCGGTTATAACCATCATTTCATTTTTCTTGTTGGTACCGTATGCTATATTTTCGGAGGGTGTTAAGTTTACTCCTTCATACCTGCAAACTGCGGCAAGCCAAGGATTGAATGTTCGAGAGCTATGTATAAGATCCGTTTTGGCTGCCTTCTGCTTCCATGCATACCAGCAGGTTTCATATGGGATATTAGAGAAAGTGTCACCTGTGACACACTCAGTCGGAAATTGCGTTAAGCGTGTCGTTGTCATCGTCTCTTCTGTTATCTTCTTCCAAACTCCTGTCTCACCTATCAATGCCCTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAGAGGATTAAGCCAATGCCAAAAACAAAGGAAGCATAG 1272 0.4025 MQQTTMSPYFLSSNLNMHNLYVSPSSSTLHLSNHITKPKFHPFQNSHSHNFSSSPLRLTIDGFACPSSSFFQTVGKSSPFFISNPKMDSFRVFAASSVPEAQSDEGKQTSGLVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTVFQFGFASLVSNLIWTLNLHPRPKISRSQLTAILPLAVAHTLGNLLTNISLGKVAVSFTHTIKSMEPFFTVVLSSLLLGEMPTLWVVSSLLPIVGGVALASMTEVSFNWIGFGTAMASNLTNQSRNVLSKKLMANEEEALDNINLYSVITIISFFLLVPYAIFSEGVKFTPSYLQTAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPMPKTKEA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0082 423 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 52 416 - -
Mtr6g0082 423 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 116 419 IPR004696 GO:0016021|GO:0022857|GO:0055085
Mtr6g0082 423 Pfam Triose-phosphate Transporter family 116 409 IPR004853 -
Mtr6g0082 423 PANTHER SOLUTE CARRIER FAMILY 35 52 416 - -
Mtr6g0082 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 334 413 - -
Mtr6g0082 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 157 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0082 Mtr-Chr6 794183 799805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0082 14 420 Antiporters AT5G33320 58.333 1.16e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0082 K15283 - gmx:100819280 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0082 6 794183 799805 Mtr6g0082 6 794183 799805 ECH