Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0065 ATGTCTGGTTTAGAAGAATTGAGAAAAAAACTTACACCTTTATTTGATGCTGAAAATGGTTTCTCATCAACTTCATCTTTTGACCCTAATGATTCTTACACTTTTTCAGATGGTGGAACGGTGAATTTGTTGAGTAGATCATATGGTGTGTATAACATCAATGAACTTGGATTACAAAAGTGTTCAACTTCAAGGTCTGTTGATGAAAGTGATGATAATGAAAAAACATATAGATGTGGCTCTCATGAGATGAGAATTTTTGGAGCAATTGGTAGTGGTGCTAGTAGTGTTGTTCAAAGAGCTATGCATATACCAACTCATAGGGTTATTGCTTTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTATGCGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCATGGTGCATTTTACACTCCAGATTCTGGACAGATAAGCATAGCTTTAGAGTACATGGATGGAGGATCACTTGCAGATATTTTGCGAATGCATAGAACGATACCTGAACCTATTTTATCGTCCATGTTTCAGAAGCTCCTACGTGGTCTAAGTTATCTGCACGGAGTCAGATATTTAGTTCACAGAGACATAAAGCCTGCTAATTTACTTGTAAATCTCAAGGGGGAGCCAAAAATTACCGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTTGCAATGTGTGCTACATTCGTTGGAACTGTTACATACATGTCACCCGAGCGAATTAGAAATGAAAGTTATTCTTATCCGGCTGATATTTGGAGCCTTGGTCTTGCGCTTCTCGAGTCTGGTACTGGAGAATTCCCGTATACAGCTAATGAAGGTCCTGTCAATCTTATGTTGCAGATCCTTGATGATCCATCACCATCACCATCAAAAGAGAAATTTTCACCTGAATTCTGCTCCTTTGTTGATGCTTGCTTACAGAAGGATCCAGATAATAGGCCAACTGCAGAGCAGCTTCTTTTGCACCCCTTCATTACAAAGTACGAGACTGCCAAGGTAGATTTACCTGGATTTGTTCGCAGTGTTTTTGATCCTACACAAAGAATGAAAGACTTGGCAGATATGTTGACAATACATTATTACTTACTATTTGACGGACCTGACGATTCGTGGCAACATACAAGGAACTTCTATAACGAAAACTCAATTTTCAGTTTCTCTGGGAAACAGCACATTGGTCCTAACAATATCTTTACAACTCTATCGAGTATCCGAACAACATTAATCGGTGACTGGCCACCGGAAAAGTTGGTGCATGTGGTTGAGAAGCTGCAATGTCGAGCACACGGTGAAGACGGAGTTGCAATAAGGGTCTCAGGATCCTTCATAATTGGTAATCAGTTTCTCATATGTGGAGATGGTGTTCAAGTAGAGGGATTACCAAACTTTAAGGATCTTGGAATTGATATTTCTAGTAAAAGAATGGGTACATTTCATGAACAATTCATAGTGGAACCAACTAGCCAAATTGGATGTTACACCATAGTTAAACAAGAACTGTACATTAACCAATGA 1560 0.3897 MSGLEELRKKLTPLFDAENGFSSTSSFDPNDSYTFSDGGTVNLLSRSYGVYNINELGLQKCSTSRSVDESDDNEKTYRCGSHEMRIFGAIGSGASSVVQRAMHIPTHRVIALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHRTIPEPILSSMFQKLLRGLSYLHGVRYLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLESGTGEFPYTANEGPVNLMLQILDDPSPSPSKEKFSPEFCSFVDACLQKDPDNRPTAEQLLLHPFITKYETAKVDLPGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDSWQHTRNFYNENSIFSFSGKQHIGPNNIFTTLSSIRTTLIGDWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGVQVEGLPNFKDLGIDISSKRMGTFHEQFIVEPTSQIGCYTIVKQELYINQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0065 519 Pfam Protein kinase domain 88 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0065 519 ProSiteProfiles Nuclear transport factor 2 domain profile. 367 517 IPR018222 -
Mtr6g0065 519 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Mtr6g0065 519 Gene3D - 366 517 - -
Mtr6g0065 519 ProSiteProfiles Protein kinase domain profile. 84 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0065 519 SMART serkin_6 84 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0065 519 SUPERFAMILY NTF2-like 365 462 IPR032710 -
Mtr6g0065 519 Gene3D Transferase(Phosphotransferase) domain 1 166 365 - -
Mtr6g0065 519 Gene3D Phosphorylase Kinase; domain 1 52 165 - -
Mtr6g0065 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mtr6g0065 519 CDD PKc_MAPKK_plant_like 85 344 - -
Mtr6g0065 519 SUPERFAMILY Protein kinase-like (PK-like) 86 382 IPR011009 -
Mtr6g0065 519 PANTHER - 2 518 - -
Mtr6g0065 519 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0065 Mtr-Chr6 666496 672492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0065 35 518 MAP Kinase Kinase Gene Family AT5G40440 77.893 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mtr6g0065 Pkinase 8.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0065 K20607 - gmx:100784935 959.518