Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0061 ATGGCAATTGTCTTTTGCTTTCCTTTCCATTCTTTATCACCAGAAATGCTCTTTGCCTCCCTTCAACTCCTTATAACTCTACCTACGAATTCTAACATTACCAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAAGAGTGGATCTTTGAAGATCTAGCCTTGCTAAGGGTGGAAAAGATATTGATGATGGCCTCAGGCTACTCAAATTCTCCATGTGCTGCTTGCAAGTTCCTAAGAAGAAAATGCAACCAAGATTGCATTTTTGCACCTTATTTCCCACCAGAAGAGCCTCATAAATTTGTCAATGTTCACAAAATATTTGGTGCAAGCAATGTTAGCAAAATTCTAAATGAAGTCTTACCTCATCAAAGAGAAGATACAGTGAATTCTCTAGCTTATGAAGCTGAAGCAAGGATTAAAAATCCAGTGTATGGTTGTGTTGGAGCTATTTCAGTCCTCCAAGGACAACTCTTTAGGCTCCAAAAGGAACTTGATGCTACAAATGCTGATTTGATTCGTTTTACTCATGAAGGTTCTTCTTCTCTTGGTCTTGGACATGTTCACTCTGATGACTTTTTCAATTACCCTTCAAATTTGAGCAATGACATGTGA 645 0.3891 MAIVFCFPFHSLSPEMLFASLQLLITLPTNSNITKSLSLSLSLSLSLSLSLSLSLKEWIFEDLALLRVEKILMMASGYSNSPCAACKFLRRKCNQDCIFAPYFPPEEPHKFVNVHKIFGASNVSKILNEVLPHQREDTVNSLAYEAEARIKNPVYGCVGAISVLQGQLFRLQKELDATNADLIRFTHEGSSSLGLGHVHSDDFFNYPSNLSNDM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0061 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 73 188 - -
Mtr6g0061 214 ProSiteProfiles LOB domain profile. 81 182 IPR004883 -
Mtr6g0061 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 73 188 - -
Mtr6g0061 214 Pfam Lateral organ boundaries (LOB) domain 82 178 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0061 Mtr-Chr6 607205 609249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0061 55 186 AS2 family AT3G27650 71.970 6.61e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr6g0061 LOB 3.4e-40 No_clan