Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0053 ATGGATGATTTGAAGGTATCTGTTGGAAGGCTGTTGGAGAATATTCTTTCCGAGGTGCAAAATGTCAAGGACAAGCAAGATATACTACAAGCTCAGCTGGAAACTCAAACTAGTGTCATATCAAATCTTGTGCAGCAAGCTTTATCTCTGTCTGCATCTGCTCTCCTGCAATCTCAACAATATCTTCCGCAATCAATTCATGTGGTTTCTACCGCTATTGCACCTCCTCAACACGGTTTACCATCTCCAATTCAACTTCCAAATCAATTCCCTCAGATCCCAAACCCAACTGTTCTTCAGAGAGATCCATACTTGCCACCACCTGTTCAATCTCAGGAAATCCCAAATCAGCAATACCAACTTCCTTTAATTCAGCAGCCACGTCCTCAACCAGGGGCGCTGCCGCATCAACAATACCAGCAGACCCCTCATTCTCAGTACTCTCAGCCAGCACCTCATCTACCTCAACAACAGCTACCACATTCATCCGGAAATCCACCTCAACTGCAATCCTCCATGGGACACCGTCTAGAGGAACCACCTTATGCACCCTTTCAGAATTATCCTCCCAATCTCCGCCATCCACCAACACTGCCCCAAGGATACGAACCACTATCAAGCATTTCTGGTGCGAGTTATTCTTCTGGATATGATACATTACCTGGGCCTGCTGAACCAAATCGATATGGCAGGCCGCCTCAGTATGGGACACCACCTCAAGGATACGAACCACCATCAAGTAGATTTGGTGCTAGTTATTCTTCTAGATATGATACATTATCTGAGATTGCTGAGCCAAATCGATATGGCGGGCCACCTCAGTATGGTGGTAAACAACCACAGCTACATACTGCTTCGGTGGCTTACATCAGTGGAAGTGGTTACCCACAACTCCCAACTGCCTACATACTCCCACAAGCAATACCTACCGAATCTTCAGTAAGTTTTGGTTCAGGTTCTCCTGGAGCTGGTAACAGGGTTTCTGTTGATCATGTAGTCGAAAAAGTTGCCACTATGGGATTCCCTAGAGAGCACGTGAGGGCAATTGTTCGGAAGCTGACAGAGAATATTTTGATTCTTCTCTTTTTATACCATTTGTTCTTATTTCTTTGA 1113 0.4537 MDDLKVSVGRLLENILSEVQNVKDKQDILQAQLETQTSVISNLVQQALSLSASALLQSQQYLPQSIHVVSTAIAPPQHGLPSPIQLPNQFPQIPNPTVLQRDPYLPPPVQSQEIPNQQYQLPLIQQPRPQPGALPHQQYQQTPHSQYSQPAPHLPQQQLPHSSGNPPQLQSSMGHRLEEPPYAPFQNYPPNLRHPPTLPQGYEPLSSISGASYSSGYDTLPGPAEPNRYGRPPQYGTPPQGYEPPSSRFGASYSSRYDTLSEIAEPNRYGGPPQYGGKQPQLHTASVAYISGSGYPQLPTAYILPQAIPTESSVSFGSGSPGAGNRVSVDHVVEKVATMGFPREHVRAIVRKLTENILILLFLYHLFLFL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0053 370 MobiDBLite consensus disorder prediction 202 216 - -
Mtr6g0053 370 Pfam UBA-like domain (DUF1421) 329 356 IPR010820 -
Mtr6g0053 370 MobiDBLite consensus disorder prediction 126 252 - -
Mtr6g0053 370 MobiDBLite consensus disorder prediction 126 172 - -
Mtr6g0053 370 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 358 - -
Mtr6g0053 370 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 358 - -
Mtr6g0053 370 Coils Coil 12 32 - -
Mtr6g0053 370 MobiDBLite consensus disorder prediction 183 197 - -
Mtr6g0053 370 MobiDBLite consensus disorder prediction 79 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0053 Mtr-Chr6 523014 527333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0053 229 356 Trihelix Transcription Factor Family AT5G14540 39.098 9.71e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0053 - - mtr:MTR_6g004940 690.649