Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0052 ATGAATACGACATCGTTTATGGACAAACAGATAATGGATCTCAGCCATGGAGGATCATCTTCCACCAATAACAACAACAACAACGATTTCATCGACCTCATCAAGAACAATCGTGAACATCACGAAGAAGAAGAAGATGAAGAAGATAATGATTCGTTAATTCATCACAAAAATGGTGGAGGAATCAAAACCGATGATATTGTTCCTAGCTACGATTTTCAACCCATTCGTTCCCTTCCTGATAATTCTTCATCATCGTTTTCCAGACCTTGGAATTCTGATTCCAATTCCAATTCCAAAAACTATGGTTCTTTGGATTCTTTTGAACCTGCAAAGGTGACTGTAGAAAAGAACCAGAGCGCTGTTGATGCTTCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTCGAAGGTGTTAGTGCGCGGTTAACCCAAGTAGAAACCAGAACTCACCATCTTGAGAGTTCCATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGAATCACTGATGGGAAATTGAGGCTGTTGGAGAATATTCTTTCTGAGGTGCAAACGGGGGTGCACGATATCAAGGACAAACAAGACATAATGCAAGCTCAGCTACAACTGGCAAAACTACAAGTGTCTAAGACGACAGAGCAACAATCAGAAACTCAAACCCGTGCCACATCAGATGCTGTGCAGCAAACTTCATCTGTATCTGCATCTGCTCCCCTGCAAACTCAACATTATCTTCCTTCGTCTTATAATCTTCCACAATCAATCCCCGTGGTTTCTCCCCCTAATGCACCTCCTCAACAAAGTTTGCCACCTCCGGCTCAACTTCCAAATCAATACTCTCAGATCCCAACCCCAACCCCAACTGTTCCTCAGAGAGATCCATACTTGCCACCACCTGTTCAATCTCAGGAAATTCCAAATCAGCAATACCAATTGCCTTTAACTCAGCAGCCACATCCTCAACCAGGGGCACCTCCGCATCAACAATATCAGCAGACCCCTCATCATCAATACTCTCAGCCACCGCCTCATCTACCTCCACAACAGCCACCGCATTCATCTGGAAATCCACCTCAACTGCAATCTTCCATGGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGACTTATCCTCCCAATCTCCGCCAGCCACCATCTCAGCCACCCAGTGGACCTCCTCAACCTTCCCAACAGTTCTATGGAACACCGCCACAAGGATATGAACCACCATCGAGTAGACCTGGTGCGAGTTACTCTTCTGGATATGGTACATTATCTGGGCCTACTGAGCCATATCGATATGGCGGACCACCTCAATATGGTAGTAAACAGTCACAACTACCTAATGCTTCGGCAGCTTCCAGTGGTGGAAACAGTTACCCACAGCTCCCTACTGCCCGCGTACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCAGGTTCTCCTGGAGCTGGCAACAGGGTTCCTGTTGATGATATAGTTGAAAAAGTTGCCACTATGGGATTCCCTAGAGATCATGTGAGGGCAACGGTTCGGAAGCTGACAGAGAATGGTCAAGCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGGTGATATGCAGCAACAAAGAGGTTGGTTCGGTCGGTAA 1698 0.4523 MNTTSFMDKQIMDLSHGGSSSTNNNNNNDFIDLIKNNREHHEEEEDEEDNDSLIHHKNGGGIKTDDIVPSYDFQPIRSLPDNSSSSFSRPWNSDSNSNSKNYGSLDSFEPAKVTVEKNQSAVDASILLEIDRTMKKHMDNLHHVLEGVSARLTQVETRTHHLESSMDDLKVSVGNNHGITDGKLRLLENILSEVQTGVHDIKDKQDIMQAQLQLAKLQVSKTTEQQSETQTRATSDAVQQTSSVSASAPLQTQHYLPSSYNLPQSIPVVSPPNAPPQQSLPPPAQLPNQYSQIPTPTPTVPQRDPYLPPPVQSQEIPNQQYQLPLTQQPHPQPGAPPHQQYQQTPHHQYSQPPPHLPPQQPPHSSGNPPQLQSSMGHHLEEPPYVPSQTYPPNLRQPPSQPPSGPPQPSQQFYGTPPQGYEPPSSRPGASYSSGYGTLSGPTEPYRYGGPPQYGSKQSQLPNASAASSGGNSYPQLPTARVLPQAIPTASAVSGGSGSPGAGNRVPVDDIVEKVATMGFPRDHVRATVRKLTENGQAVDLNTVLDKLMNEGGGGDMQQQRGWFGR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0052 565 MobiDBLite consensus disorder prediction 298 312 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 1 104 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 76 104 - -
Mtr6g0052 565 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 565 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 222 477 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 452 477 - -
Mtr6g0052 565 Coils Coil 31 51 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 222 267 - -
Mtr6g0052 565 Pfam UBA-like domain (DUF1421) 507 550 IPR010820 -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 313 328 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 425 439 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 1 32 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 268 289 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 385 412 - -
Mtr6g0052 565 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 565 - -
Mtr6g0052 565 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0052 Mtr-Chr6 514395 520284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0052 130 550 Trihelix Transcription Factor Family AT3G01560 43.692 1.94e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0052 - - gmx:100777464 635.565