Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0044 ATGGACTCTCCTATGACTGCAGTTGAAACTATATCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCTTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTAGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGAGGTTGCCAACAAAATTATGCAGCAAGCAACTGTTTGATGATGATTCCGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCCGAGAGTTGTATCTTAGTTCCATCGAAACGGGCCGTTGTTAATCAACCGAAGAATTACTATTCTCAGCCAGAGACTAGTTTTTGTCTTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCGGAAGCGAAACAAAGTTTCACCGATACTGAAGTCAGTGAGTGTGTCAGTGTTGATGATAAGTCGTATGAAAGCGGAGAAGTTCCGAATTCGTGTGATTTTAATGAAAGTAGGAAAACCAGCATCTGTAGAGCGAGTACCGGAAGTGATGTTAGCAATGAAAGCAACACGAGTAGTCTGAGCAGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGTGAGGGGATGTTGGAAATGAGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTTGCACAAGGACTTTTTTTGCCATGAAACTCATGAACAAAACCGAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCGGAGCACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAACCGGAGAATGTGTTGGTGAGAGAAGATGGTCATATCATGCTCTCAGATTTCGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCATCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGTTAGTCGCTGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGAGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCGTTCAAAGGTTCTGGGAATCGAACCACAATGTTTAATGTTGTTGGGCAGCCATTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCTCCAGAAGTACCAAGACAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTAATTATTTAGAATTTGATTACTTTTGA 1893 0.4226 MDSPMTAVETISEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERRLPTKLCSKQLFDDDSENFDSSSEVLESESCILVPSKRAVVNQPKNYYSQPETSFCLSPQNSYYSATVYSEAKQSFTDTEVSECVSVDDKSYESGEVPNSCDFNESRKTSICRASTGSDVSNESNTSSLSSALYKPHKANDIRWEAIQAVRAREGMLEMRHFRILKRLGSGDIGNVYLAELSCTRTFFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQTMMMKPNSTENEVGMNPSGNYLEFDYF* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0044 630 Gene3D Phosphorylase Kinase; domain 1 251 336 - -
Mtr6g0044 630 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 104 630 - -
Mtr6g0044 630 CDD STKc_phototropin_like 251 602 - -
Mtr6g0044 630 SUPERFAMILY Protein kinase-like (PK-like) 230 607 IPR011009 -
Mtr6g0044 630 Gene3D Transferase(Phosphotransferase) domain 1 337 405 - -
Mtr6g0044 630 ProSiteProfiles Protein kinase domain profile. 253 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0044 630 PANTHER FLIPPASE KINASE 1-RELATED 104 630 - -
Mtr6g0044 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Mtr6g0044 630 MobiDBLite consensus disorder prediction 28 55 - -
Mtr6g0044 630 SMART serkin_6 253 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0044 630 Gene3D Transferase(Phosphotransferase) domain 1 478 602 - -
Mtr6g0044 630 Pfam Protein kinase domain 254 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g0044 630 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0044 Mtr-Chr6 402867 405601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0044 160 630 AGC Kinase Gene Family AT5G47750 68.826 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr6g0044 Pkinase 6.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0044 K08286 - gmx:100810909 947.577