Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0042 ATGACCATGTTTGTTTATACAACAATAGCTTGTGCAATCTTTTCCTTCCTATGCATCATCTTCCAAATCCATAGAAGACGATGTTGCAAATATCCCATCTTGATAGATTATACTTTTCTTGGCATGTTACCATCACTCCTTTGGAACTTGTGGAATATTCATGATTTCTTAGCTGCGTTATTGAAGCAACATAGAGGTAGTGGTGAGTTCATGGGACCTTGGTTTACCAAAATGAATTATTTCATCACTAGTGACCCCATGAATGTGCATCACATAATGAGCAAGCGTTTTGACAATTATGTGAAGGGTCATGAATTTCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACGCTGATTCAAAGACATGGAAATATAATAGGTCTCTTCTTCACTCTATTTTTAAACAAAGAAGCTTTGAATTGTTTCAAGAGAAAATCATTCAAAACAAGTTGGAGAGAAGTTTGATTCCTTTGTTGGACCATGTACAACAACAAGGGTCAGTGGTTGATTTACAAGATGTCTTCAATCGCTTCACATTTGATAACATTTGTTCTGTAGTTCTTGGATGCGATCCTAACTGTCTTTCCATTGACTTCCCAGACGTTGCTTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTATAGGCATGTTGTGCCAAGAAGTGTTTGGAGGTTGCAACAATTACTTCAAGTTGGTCAAGAGAAAAAGATGACCAAAGCATGCAAAGAATTTGATCAATTTATATATTCAAATATAGAGTCCAAAAGAGTGGAGCTAAGGAAAGGTACCAAAAATATTGATGAAATGGGTGATTTGTTAACCACTTTGATGAATGAAGAGAAGGGATCACAAGTAGTACAACATGACGACAAGTTTCTAAGAGATGCTGCTTTCAATCTCTTTGTAGCCGGAAGAGATACTATAACTTCAGCGCTTACATGGTTATTTTATCTCGTTGCTACACATCCTTTAGTAGAAACCAAGATTCTTGAAGAGATTAAAGAACATTTTGGAACCATTAATATTGATCAAAAGAAGTTAGGGGTTGATGAAGTGAAGAAGCTAGTTTATCTTCATGGTGCTATATGTGAGGCTATAAGGCTTTTTCCTCCTATACCCTTTGAGCGCAAGAAAGCAATTAAAGGTGATGTACTTCCAAGTGGTCATATTATTAATCCAAATACAATTATATTATTTTCTTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAGAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGTAGCATTGTTCATGAACCGTCTTATAAGTTCTTTAGTTTTAATGCTGGACCAAGGACTTGTTTGGGAAAGGACTTGTCCTTCATTCAAGTTAAAATGATAGCAATTGCTATTTTGAGCAAATATTGTGTTCAAGTAGTGGATGGTCATGTTCCTATATTAAGTCATTCAATTGTACTTCTAATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGATGA 1518 0.357 MTMFVYTTIACAIFSFLCIIFQIHRRRCCKYPILIDYTFLGMLPSLLWNLWNIHDFLAALLKQHRGSGEFMGPWFTKMNYFITSDPMNVHHIMSKRFDNYVKGHEFHEIFEAFGDGIFNADSKTWKYNRSLLHSIFKQRSFELFQEKIIQNKLERSLIPLLDHVQQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFDQIEECIFYRHVVPRSVWRLQQLLQVGQEKKMTKACKEFDQFIYSNIESKRVELRKGTKNIDEMGDLLTTLMNEEKGSQVVQHDDKFLRDAAFNLFVAGRDTITSALTWLFYLVATHPLVETKILEEIKEHFGTINIDQKKLGVDEVKKLVYLHGAICEAIRLFPPIPFERKKAIKGDVLPSGHIINPNTIILFSLYSMGRFEEIWGEDCLEFKPERWISERGSIVHEPSYKFFSFNAGPRTCLGKDLSFIQVKMIAIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0042 505 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PANTHER CYTOCHROME P450 8 503 - -
Mtr6g0042 505 SUPERFAMILY Cytochrome P450 23 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0042 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 503 - -
Mtr6g0042 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Mtr6g0042 505 Pfam Cytochrome P450 52 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0042 Mtr-Chr6 384289 386135 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0042 8 505 Cytochrome P450 AT2G23180 46.535 1.27e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0042 - - aprc:113867564 703.36