Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0040 ATGCTTAGTTATACATCAATAATTTATGCACTCTTCTTCTTCTTCCTATGCATCGTCTTCCAAATTCATCGTTGGAGACGTTGCAAATACCCAATTCTTACAGATTATCCAATTTTTGGCATGATAATACCATTATTGTGGAACTTGCCTCGAGTTCATGATTTCATAACTCAGCTGTTGAAAAAACAACATAGGAACACATGTGAGTTCATGGGACCTTGGTTTACCAGCATGAACTATTTGGTCACTAGTGACCCCATCAACTTGCATCACATGTTAAGCAAGTCTTTTGACAATTATGTTAAGGGTCATGAATATCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACACTGATTCGGAGACATGGAAATACAATAGGTCTCTTTTTCACTCTATTTTGAAAATAAGAGATTTTGAAATGTTTCAAAAGAAAATCATTCAAAACAAGTTGGAGAAAAGTTTGATTCCTTTGTTGGACCATGTACAACAACAAGGCTCAGTGGTGGATTTACAAGATGTCTTCAATCGTTTCACATTCGACAACATTTGTTCCGTGGTTCTTGGATGTGATCCTAATTGTCTTTCCATTGATTTTCCCGATGTCGCGTGTGAGAAGGCTTTCAACCAAATCGAAGAGGGCATATTCTATAGACATAAAGTGCCTAAAAGTGTTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAATATGACCAAGGCATGCAAAACCTATGATCAATTTGTATATGCAAATATAAAGTCAAAGAGGGAAGAGCTAAGCAAATGTAGAAAAAATAATGAGATGGTTGATTTGCTAACAACTTTGATGAAAGAAGAAAAGGGGTCACAAGTAGTAATGCATGATGATAAGTTTTTGAGGGATGTTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCGCTTACATGGCTCTTCTATCTCATTGCTACACACCCTTTAGTGGAGGCTAAGATTCTTGAGGAGATTAAAGAAAATTTTGGGACCATCAATATTGAAAAGAAATTAGGGATTGATGAGTTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTCTAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTAAAGGTGATATACTTCCAAGTGGCCATATTGTTAATCCTAATACAATAATACTATTTTTCTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGGCATTGTTCATACACCATCTTACAAGTTTATTAGTTATAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCCTTCATTCAAATTAAGATGACAACAATTGCTATTTTGAGCAAATATTGTGTCCAAGTAGTTGATGGTCATGTTCCTATCTTAAGCCATTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA 1518 0.357 MLSYTSIIYALFFFFLCIVFQIHRWRRCKYPILTDYPIFGMIIPLLWNLPRVHDFITQLLKKQHRNTCEFMGPWFTSMNYLVTSDPINLHHMLSKSFDNYVKGHEYHEIFEAFGDGIFNTDSETWKYNRSLFHSILKIRDFEMFQKKIIQNKLEKSLIPLLDHVQQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFNQIEEGIFYRHKVPKSVWKLQKWLQIGEEKNMTKACKTYDQFVYANIKSKREELSKCRKNNEMVDLLTTLMKEEKGSQVVMHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGIDELKKLVYLHGAICEALRLFPPIPFERKQAIKGDILPSGHIVNPNTIILFFLYSMGRFEEIWGKDCLEFKPERWISERGGIVHTPSYKFISYNAGPRTCLGKDLSFIQIKMTTIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKREI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0040 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PANTHER CYTOCHROME P450 10 503 - -
Mtr6g0040 505 Gene3D Cytochrome P450 16 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 Pfam Cytochrome P450 42 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 503 - -
Mtr6g0040 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g0040 505 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0040 Mtr-Chr6 363233 364930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0040 8 504 Cytochrome P450 AT2G23180 45.455 1.78e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0040 - - aprc:113867564 692.575