Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0027 ATGGTTTCACTCTCCAAATTTGCGTTATCAGTTTCTATGTTGCTAGCTATTATTTTTGTTTTTCAGTTGAAGGGTGGTAATAGTTTCAGTATCCTTAAGCCCGTAGTACACATGTATATTACCAACAACTTGACCAATGGTGAACAACTCGGAGTCCACTGTAAAGACAAAGATCATGATATTGGATATCGAGCAATACATTTTCAAGAACCTTACGCTTTCACTTTTAGGCCTGCTTTCTTCATATCAAATACCTTATATTTTTGTGGATTTAACTTTGGTTCTGAATCTCACTACTTTGATGTTTACGTTCAAGACAGAGATGAGAAAGCTGTCGACAAAGAATGTCATTGGCAAATAAATAAATATGGACCATGTAGGGTTAATGTTTTAGTTAATCCCAACTCTATAGAATGCTTCCCATGGCCTTCTGATTAA 438 0.3539 MVSLSKFALSVSMLLAIIFVFQLKGGNSFSILKPVVHMYITNNLTNGEQLGVHCKDKDHDIGYRAIHFQEPYAFTFRPAFFISNTLYFCGFNFGSESHYFDVYVQDRDEKAVDKECHWQINKYGPCRVNVLVNPNSIECFPWPSD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0027 145 Pfam Plant self-incompatibility protein S1 37 142 IPR010264 -
Mtr6g0027 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 142 - -
Mtr6g0027 145 PANTHER - 16 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0027 Mtr-Chr6 263449 263886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0027 34 144 Carbohydrate Esterase AT3G16970 38.596 3.69e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0027 - - mtr:MTR_6g004340 178.333