Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0026 ATGTCATCCAACAATCTCTCTGTCATTCTTCCTCATGTTCTAATCGTTTCTAGACGAACCCTTCGTAAGAACAAGTTCGTCGATTTCGTCGGTGAATATCACCTTGATCTTATAGTAGCAAATGGTGCGGTACCTGTGATTGTACCACGTGTTTCAGGTATACACATGTTGTTAAAGAGCTTTGAACCAATTCATGGTGTTCTTCTATGTGAAGGAGAAGACATAGATCCTTCATGGTACGAACAAGATAACACAACATGTAATCTTTCACATGAAGAGTTAGAAGAAATCAAAAAGCTTCATTCAAGTGACACAAACATTGACAAAGAAAAAGATTCAATTGAATTAATCTTAGCAAAGCTTTGTCTTGAAAGAAACATTCCTTACTTAGGAATTTGTAGAGGTTCACAAGTCCTTAATGTTGCATGTGGAGGTACCCTTTATAGGGACGTATCAAAAGAGCTTTCAAAAAATAGCCATGTGATGCATATAAACTATGATGATTATGATGGTCATAGACATGTTATTAAGGTTGTTAAAAACACACCTTTGTTTGATTGGTTTAAGGATTCTTTGAAAAATGAAGGAATGGATGAGATTTTGGTTAATAGCTATCATCATCAAGGGGTTAAGAGATTGGCACAACGTTTTGTTCCAATGGCTTTTGCTAATGATGGTTTAATTGAAGGGTTTTATGACCCTTATGCTTATAATCCAGAAGAGGGTAAGTTTATTATGGGTTTGCAATTTCACCCTGAGCGTATGAGAAAACCTAATTCAGATGATTTTGATTACCCTGGATGCCCATATGTCTACAAGGAGTTTGTGAAGGCAGTGATTGCTTTTCAGAAAAGGCTGAATACTTTAACATCAGTGCCAAAACGTATGAAACTAAACAAGGAAATCAAGAACAAAAGGAGGATTATAATGCGTAGCTTTTCAGTTGCAAAAAAACTATACACTACCGGTCGTGGGAAATGTTCTTCCAAAGAGTGGGAGCTTGAAGCTGGAGCCAAATTTCTCGAGTCAAACACGGCTTTAAAGCAAATTGGAGCAACTGTTAGGAATGCAGGGTCATATATGAAGCAAAGTGAAAAAATGACAAAAAATGTAATGGGAAAAATGTCGGTGGAGCAATTATCTGACCTACTTTCTTTCTACCACACAATGGGGCAGATTTGTTCTCAAGTATTAGAAAGAAAGTTACATGATGTTGTCAATGACTTTAATTAA 1233 0.3633 MSSNNLSVILPHVLIVSRRTLRKNKFVDFVGEYHLDLIVANGAVPVIVPRVSGIHMLLKSFEPIHGVLLCEGEDIDPSWYEQDNTTCNLSHEELEEIKKLHSSDTNIDKEKDSIELILAKLCLERNIPYLGICRGSQVLNVACGGTLYRDVSKELSKNSHVMHINYDDYDGHRHVIKVVKNTPLFDWFKDSLKNEGMDEILVNSYHHQGVKRLAQRFVPMAFANDGLIEGFYDPYAYNPEEGKFIMGLQFHPERMRKPNSDDFDYPGCPYVYKEFVKAVIAFQKRLNTLTSVPKRMKLNKEIKNKRRIIMRSFSVAKKLYTTGRGKCSSKEWELEAGAKFLESNTALKQIGATVRNAGSYMKQSEKMTKNVMGKMSVEQLSDLLSFYHTMGQICSQVLERKLHDVVNDFN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0026 410 Gene3D - 10 288 IPR029062 -
Mtr6g0026 410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 23 285 - -
Mtr6g0026 410 SUPERFAMILY Class I glutamine amidotransferase-like 30 284 IPR029062 -
Mtr6g0026 410 PANTHER CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE SUPERFAMILY PROTEIN 4 409 - -
Mtr6g0026 410 CDD GATase1_2 13 262 - -
Mtr6g0026 410 PANTHER GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED 4 409 IPR044668 GO:0016811
Mtr6g0026 410 Pfam Peptidase C26 30 253 IPR011697 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0026 Mtr-Chr6 226588 228800 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0026 - - gmx:100785626 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0026 6 226588 228800 Mtr6g0026 6 226588 228800 ECH
Mtr6g0026 6 226588 228800 Mtr7g2208 7 38392299 38416623 PCT