Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0017 ATGGCTTATAGGAACAATAGAGTTTGCGACCATCTAACCCTAGGAGTGTGCCACTGTACAAGCAATGATGACTCTTGGAACATCAAGAAAGTGTTGAAACAAACTGATGTTGGTTATTGCAGTCGACTTTTGTTGGGTAAAAAATTGGCTGAAGAATTTGTGTTACCTGTGTTGGGTGCTAAAGCTCATAGAGGAATTCAAGTTAAAATATGGGATATTGACACCAAGTCCATGCACACTATCAAATTCAAGAGACGTTCTGGTATGTATTTTTTCAATGGTGGTTGGGTCAAAGAGTTTGTCATCAGAAGAGGCTTACAAGAAGGGAATAAGATTGGTCTTTATTGGGATCAATATGGTAAATTCTTTAATTTTACTGTTCTTGAGGCCGATAAGGATCAGAATAGACACTATGTTTGA 420 0.3762 MAYRNNRVCDHLTLGVCHCTSNDDSWNIKKVLKQTDVGYCSRLLLGKKLAEEFVLPVLGAKAHRGIQVKIWDIDTKSMHTIKFKRRSGMYFFNGGWVKEFVIRRGLQEGNKIGLYWDQYGKFFNFTVLEADKDQNRHYV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0017 139 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 20 131 - -
Mtr6g0017 139 CDD B3_DNA 26 128 IPR003340 GO:0003677
Mtr6g0017 139 SMART B3_2 28 131 IPR003340 GO:0003677
Mtr6g0017 139 Gene3D - 20 138 IPR015300 -
Mtr6g0017 139 SUPERFAMILY DNA-binding pseudobarrel domain 23 125 IPR015300 -
Mtr6g0017 139 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 20 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0017 Mtr-Chr6 130914 131333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g0017 28 123 B3 DNA Binding Superfamily AT3G24650 37.624 7.44e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0017 - - mtr:MTR_6g004120 297.745