Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0002 ATGAACAACATGTTGCTTCCGATTCACACCAATTGCTTTCTTCCACTTGTCTATGCTGCGTTTCCACATAAGATTCAGGATGTTCGTTTTATGGTCAACAACTGCGCCCCCACTTTCACAAAGTATTGTCAATTTGGGATTCATTATTCTTATTATTATTATCATCATACAACAACAAGAAGAAGACGTTCATATTGTCGTTCTGGGATGAGGGACACAGTAGTCTCTGATTGGGAACTGCAGGAAGGTCGTATCGCGGTTTCAATTTTTCTTCAACAAATGGGTGTGTCGGCCGAGGAATCAAAATCAATAGCATCAAACTCCCCAGCATATCTCAACATGTTGGTAGAAAGTGTTAGGGATTTGGAGCACTTCTCTTCTTCTATGCTGGATGCTAATGCTAATGCTGACGGTGCGTTCAACTTGAACTTCAACTACAGGGACAAGATTCTTCACATTGCAGCTCTCAAAGGTGACAACGGCAAACTAGCCTACTTAGAGAGTCTCGGCTTCACACTCTCTTCCTCAATGAACGTCGCCAGGTATATATCCTCCGCTCACACCCTCCTGTCTCTCATTAACAAAGTTACCTCTATCAAACAACTCCTTTTTCCTCCCGCGCACACTACTCATCACTATCAACTCCTTATCAAGAATATTCGTCTCATCATGACCCACTTATCAATTTCACTAGATGAAGATATGCAACACACTTTCTCCTTTTTCGAAAAGGTTCAAGCAAGGCGTGGAGGTTTAAATATCCTTGCTTCTCAAGATGCTGCTTTCCGTTGCTTCATTGAATCATTTCCTCGTATACTTTTGTTATCACTAAATAATCACATCTCACCTACACTGGATATTCTCCAAAATATTGGGATCCCCGCAGATCGCATCCCCAACATAATATTGGCTTTTCCTCCTATTCTGCTCTGGAATGTTGAACTCCTTCAGACTAGAGTTCTGGCCTTGAACCAGATTGATGGTGTGGATAAAGATTATGCCAAGTTGATGCTAAAATATCCGTGGGTTCTATCTACAAGCATTCAAGAGAACTATAAGGAGGTCCTTGCCTTTTTACATTCCGTGAAGGTTCCAAAGACATGGACAGACCGTGCAATCAAAAGACAACCTCAACTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTAGATCAGTTTGCCGAACTAGGAGTTCAAAGGAAAAAGTTGTATCAGGTTATCACTAGAAGTCCTCAGCTATTATTACAGAAGCCCGAAGACTTTCTACAGGTTGTTATGTTCTTCGAAAATATGGGTTTTGATAAGGAAAATATTGGGAGAATACTTGCTCGCTGCCCTGAAATTTTTGCCACCAGCATTAGTAAAACTTTACAGAGCAAGATTGAGTTCCTTAGTAGAATTGAAGTTTCTAAAGCTTACATTCCTTTGGTTATCAGAAAGTATCCAGAACTACTTGTGTCTGACATTAACAAAACCTTACCTCAACGGATAGTGTACTTTATGAAGGTAGGACTTTCAGAGAAGGAAATTGCACTTATGGTACGTAAATTTTCTCCTCTACTTGGGTACAGCATAAAGGAGGTTCTGATGCCAAAATTAGAATTTCTGGTGAACTCAATGAAGAGGCCGGTAAGAGACGTGGTGCGCTACCCTAGGTATTTTAGCTATTCACTAGAAAAGAAGATAAAGCCAAGATATCGGGTTCTGAAAGGAAGGAATATCGAATGTAGCTTAAAGGATATGCTGGCAAAAAATGATGAAGAATTTGCTGCTGCATTTATGGGTGTTGGAAAGATGCTCGTCTGTCCTCCTTTGTCTTCACATGATAAGCTGTAA 1839 0.4057 MNNMLLPIHTNCFLPLVYAAFPHKIQDVRFMVNNCAPTFTKYCQFGIHYSYYYYHHTTTRRRRSYCRSGMRDTVVSDWELQEGRIAVSIFLQQMGVSAEESKSIASNSPAYLNMLVESVRDLEHFSSSMLDANANADGAFNLNFNYRDKILHIAALKGDNGKLAYLESLGFTLSSSMNVARYISSAHTLLSLINKVTSIKQLLFPPAHTTHHYQLLIKNIRLIMTHLSISLDEDMQHTFSFFEKVQARRGGLNILASQDAAFRCFIESFPRILLLSLNNHISPTLDILQNIGIPADRIPNIILAFPPILLWNVELLQTRVLALNQIDGVDKDYAKLMLKYPWVLSTSIQENYKEVLAFLHSVKVPKTWTDRAIKRQPQLLGCSTSKLKLMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFLQVVMFFENMGFDKENIGRILARCPEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKVGLSEKEIALMVRKFSPLLGYSIKEVLMPKLEFLVNSMKRPVRDVVRYPRYFSYSLEKKIKPRYRVLKGRNIECSLKDMLAKNDEEFAAAFMGVGKMLVCPPLSSHDKL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0002 612 Gene3D Transcription termination factor 3, mitochondrial 386 599 IPR038538 -
Mtr6g0002 612 PANTHER CGI-12 PROTEIN-RELATED 48 605 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 Pfam mTERF 285 591 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 440 471 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 405 435 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 370 400 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 476 507 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 334 365 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 512 544 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 SMART mt_12 545 576 IPR003690 GO:0003690|GO:0006355
Mtr6g0002 612 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 48 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0002 Mtr-Chr6 33338 40671 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr6g0002 mTERF 2e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0002 K15032 - gmx:100802127 703.745