Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3583 ATGGGCAATACATGTCGTGGATCTTTAAAAGGTAAATATATTCAAGAAGGCTATACCCAGCCTGTTGACCATTCTTCAAAGCGAACAATCATCTCTGACAACAACAACAACAACAACAACAACGACTCTAATTCAGATCATCATAATCATCATCGCAACAACAACAAACCACTCAATCCCCCACCACCACCTTCCTTCAACTTTAAGAACGACGCCATGCGCCGCGGCCCTGATAATCAGACTTATTATGTCTTAGGTCATAAGACTCCCAACATTCGTGATCTCTACACTCTTGGCCGCAAGCTTGGTCAAGGTCAATTTGGCACCACTTTCTTAGCCATCGATAATTCCACCTCCATTGAATATGCTTGCAAATCCATCTCTAAGAGGAAGCTCATTTCCAAGGAGGATGTTGAGGATGTTCGCAGAGAAATTCAGATTATGCATCATTTGGCTGGTCACAAGAACATTGTTACCATCAAGGGTGCCTATGAGGATGCTCTCTATGTCCATATTGTCATGGAGCTTTGTTCTGGTGGCGAGCTCTTCGATCGTATCATCCAGAGAGGTCATTATACCGAGAGGAAGGCTGCTGAGTTGACCAGAATTATTGTTGGTGTTGTCGAGGCCTGTCATTCCCTTGGTGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTGTTGGTTAACAAAGATGACGATTTCTCTCTTAAAGCTATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTTTTCACCGATGTAGTTGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACGGCGGGTGTCATACTTTATATATTGCTCAGTGGTGTGCCACCGTTTTGGGCAGAGACCCAGCAGGGTATATTCGATGCAGTGTTGAAGGGACATATAGATTTTGACTCAGAGCCATGGCCTCTAATATCTGATAGTGGAAAAGATCTTATTAGAAAGATGCTGTGTTCTCGGCCTTCAGATCGGTTAACCGCTCATGAAGTTTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCTGACAGATCATTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTTTACGGGTAATTGCTGAAAGTCTTTCCGAGGAAGAAATTGCTGGTTTGAGAGAAATGTTCCAGACTATGGATACTGATAACAGTGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATAGAAATACGCGACCTTATGGAAGCGGCTGATGTGGACAACAGTGGAACTATAGATTATGGGGAGTTCATTGCTGCAACCGTTCATCTCAACAAACTGGAGCGTGAGGAACATCTTGTTGCAGCATTCCAGTATTTTGACAAGGACGGAAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTACAGAACATAACATGACTGATGTTTTTCTTGAAGATATTATCAAGGAAGTTGATCAAGATAACGATGGAAGGATTGATTATGGTGAATTTGTTGCCATGATGCAAAAAGGCAATGTTGGGATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTGAGCATGAGGGACGCACCAAGTGCTCATTAG 1680 0.4286 MGNTCRGSLKGKYIQEGYTQPVDHSSKRTIISDNNNNNNNNDSNSDHHNHHRNNNKPLNPPPPPSFNFKNDAMRRGPDNQTYYVLGHKTPNIRDLYTLGRKLGQGQFGTTFLAIDNSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDALYVHIVMELCSGGELFDRIIQRGHYTERKAAELTRIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSEPWPLISDSGKDLIRKMLCSRPSDRLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQTMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACTEHNMTDVFLEDIIKEVDQDNDGRIDYGEFVAMMQKGNVGIGRRTMRNSLNLSMRDAPSAH* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3583 559 Gene3D - 364 536 - -
Mtr5g3583 559 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Mtr5g3583 559 Gene3D Phosphorylase Kinase; domain 1 98 181 - -
Mtr5g3583 559 Pfam EF-hand domain pair 402 462 IPR002048 GO:0005509
Mtr5g3583 559 Pfam EF-hand domain pair 472 533 IPR002048 GO:0005509
Mtr5g3583 559 ProSiteProfiles Protein kinase domain profile. 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3583 559 SMART efh_1 401 429 IPR002048 GO:0005509
Mtr5g3583 559 SMART efh_1 473 501 IPR002048 GO:0005509
Mtr5g3583 559 SMART efh_1 507 535 IPR002048 GO:0005509
Mtr5g3583 559 SMART efh_1 437 465 IPR002048 GO:0005509
Mtr5g3583 559 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 54 544 - -
Mtr5g3583 559 Gene3D Transferase(Phosphotransferase) domain 1 182 363 - -
Mtr5g3583 559 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Mtr5g3583 559 ProSiteProfiles EF-hand calcium-binding domain profile. 508 538 IPR002048 GO:0005509
Mtr5g3583 559 MobiDBLite consensus disorder prediction 16 79 - -
Mtr5g3583 559 Pfam Protein kinase domain 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3583 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 544 - -
Mtr5g3583 559 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Mtr5g3583 559 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Mtr5g3583 559 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Mtr5g3583 559 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Mtr5g3583 559 SUPERFAMILY EF-hand 378 535 IPR011992 -
Mtr5g3583 559 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Mtr5g3583 559 SUPERFAMILY Protein kinase-like (PK-like) 79 379 IPR011009 -
Mtr5g3583 559 MobiDBLite consensus disorder prediction 19 43 - -
Mtr5g3583 559 CDD STKc_CAMK 96 353 - -
Mtr5g3583 559 SMART serkin_6 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3583 559 ProSitePatterns EF-hand calcium-binding domain. 516 528 IPR018247 -
Mtr5g3583 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3583 Mtr-Chr5 44694448 44702137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3583 1 555 EF-hand Containing Proteins AT2G17290 81.982 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr5g3583 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3583 K13412 - gmx:100778173 975.696