Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3570 ATGGGTTGTTGTGAATCCTCTTTGTTGAGAAGAGGAAGAGGAAGAGGAGGAAGTGAGAATAATCAGAAGAAGAAGGAACAACAACAACAACAACCCTATCAGCTTCAACACCTCCGTAGTAGCAACAATCTTCTGAATAATCAAACACAAACTACTGAAACCGACAATAAAGAATCATCATCACCAGATCCTTCAACTTTCACTTTTTCAGAGTTTTCACTTTCAGACCTCAAAGCAGCTACCAATAATTTCAGCTCAGAATATATTGTTTCTGAGAGCGGTGAAAAGGCACCTAATTTGGTTTACAAAGGAAGGTTACAGAATCAGAAACGTTGGATTGCTGTGAAGAAGTTCGGTAAAGCTGCTTGGCCGGATCCAAAACAGTTTGTTGAAGAAGCTTCTGGTGTTGGCAAATTGCGTCATCCTCGACTTGCTAATTTGATTGGTTATTGTTGTGATGGTGATGAGAGGTTACTTGTTGCTGAGTTTATGCCTAATGATACCCTTGCTAAACACCTCTTTCACTGGGAAAATCAAACTATTGAGTGGGCCATGCGTTTAAGAGTTGCTCTTTATATTGCACAAGCTTTGCATTATTGTACTTCTGAAGGACGCCCTTTATACCATGATTTGAATGCTTATCGCGTTCTTTTCGATGAGGAAGGTGATCCGCGTCTCTCTTGTTTTGGTTTAATGAAGAACAGTAGGGATGGCAAAAGTTATAGCACAAACCTTGCTTACACACCTCCTGAATATTTAAGAAATGGAAGGGTTACCCCTGAAAGTGTCATTTACAGCTTTGGAACTGTTCTTCTTGACCTACTCAGTGGCAAGCACATCCCTCCCAGTCATGGAAAAAACAACATGCTCTTGATGGATTCTCATTTGGAGGGGAAGTTTTCTACAGAGGAGGCAACAGTAGTTGTCAATCTTGCCTCTAAGTGTTTGCAATATGAACCGCGAGAACGGCCTAATACAAAGGATTTGGTCACAACACTTGCTCCATTGCATACAAAACCGGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCAAGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCAATGGGTGAGGCTTGCTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTACAACCCACTACAGAGATGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGATTTTAAGACGGCCATTGATAACTATTCCCAGTTCATTGATGTGGGAACGATGGTCTCACCTACAGTTTTTGCAAGGCGTAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCTCTACGAGATGCAATGCAAGCACAATGTGTTTATCCAGACTGGCCCACATCTTTCTACATGCAGTCAGTTGCTCTTGCAAAGCTGAACATGCACAAGGATGCAGCTGACATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGCGAGAGGATCATAG 1557 0.4284 MGCCESSLLRRGRGRGGSENNQKKKEQQQQQPYQLQHLRSSNNLLNNQTQTTETDNKESSSPDPSTFTFSEFSLSDLKAATNNFSSEYIVSESGEKAPNLVYKGRLQNQKRWIAVKKFGKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCTSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPNTKDLVTTLAPLHTKPDVRSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVTTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTSFYMQSVALAKLNMHKDAADMLNEAAALEEKRQRGARGS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3570 518 Gene3D Phosphorylase Kinase; domain 1 56 163 - -
Mtr5g3570 518 ProSiteProfiles Protein kinase domain profile. 87 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3570 518 Pfam Protein tyrosine and serine/threonine kinase 101 333 IPR001245 GO:0004672|GO:0006468
Mtr5g3570 518 Gene3D Transferase(Phosphotransferase) domain 1 165 350 - -
Mtr5g3570 518 Coils Coil 490 510 - -
Mtr5g3570 518 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 516 IPR045845 GO:0004672|GO:0009742
Mtr5g3570 518 MobiDBLite consensus disorder prediction 1 35 - -
Mtr5g3570 518 SUPERFAMILY Protein kinase-like (PK-like) 58 337 IPR011009 -
Mtr5g3570 518 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 516 - -
Mtr5g3570 518 SUPERFAMILY TPR-like 410 511 IPR011990 GO:0005515
Mtr5g3570 518 Gene3D Tetratricopeptide repeat domain 407 516 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3570 Mtr-Chr5 44523508 44531166 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3570 45 341 Glycoside Hydrolase AT3G07070 34.154 2.24e-47 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mtr5g3570 PK_Tyr_Ser-Thr 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3570 K14500 - gmx:100808907 888.256