Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3561 ATGGCTACACAAGTTCTATTGTCGTCGTCATCTCTTACTTTTGCAGCTGAAGCTGTAAGACAGAGTTTTGGAGCAAGATCACTCCCATCTTCAATTGGGTCTTCTAGAAAAGGATCCTTTGTTGTCAAGGCAGCTGCTCCTGTCAAGAAAGGTGGTGCAAATAGACAATTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGCCTTCCTGGTGACTTTGGATTTGACCCTCTAGGACTTTCAGATCCTGAAGGAGTCGGTGGATTCATTGAGCCAGAATGGTTAGCATACGGCGAGATAATCAACGGCCGCTTCGCAATGTTGGGAGCAGCAGGAGCTATAGCACCTGAAATTCTCGGCAAAGCAGGTTTAATTCCCGCGGAAACAGCACTCCCTTGGTTCCAAACCGGCGTGATTCCACCAGCAGGAACATACAACTACTGGGCAGACAATTACACACTCTTTGTGATGGAAATGGCATTCATGGGATTTGCAGAACACAGAAGACTCCAAGATTGGTACAATCCTGGTTCCATGGGAAAACAATACTTCTTAGGACTTGAGAAAGGGCTTGGAGGTTCCGGCGAACCAGCATACCCTGGTGGACCTATATTTAACCCTCTTGGTTTTGGTAAAGATGAGAAATCATTGAAAGAATTAAAGCTGAAGGAAGTTAAGAATGGAAGGTTAGCAATGTTGGCAATATTGGGTTACTTTATTCAAGCTCTTGTTACAGGAGTTGGACCATACCAAAACCTCTTAGATCATTTGGCTGACCCTGTCAACAACAACATCTTGACCAGTCTCAAGTTCCACTAA 828 0.4457 MATQVLLSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAAAPVKKGGANRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSLKFH* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3561 275 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 274 - -
Mtr5g3561 275 Pfam Chlorophyll A-B binding protein 66 245 IPR022796 -
Mtr5g3561 275 Gene3D Chlorophyll a/b binding protein domain 56 274 - -
Mtr5g3561 275 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 274 IPR001344 GO:0009765|GO:0016020
Mtr5g3561 275 SUPERFAMILY Chlorophyll a-b binding protein 54 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3561 Mtr-Chr5 44447958 44450046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3561 19 275 Chloroplast and Mitochondria Gene Families AT1G61520 88.372 2.16e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3561 K08909 - gmx:100784090 466.463