Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3512 ATGCAGGCATCAGAGCAGCATAGAAGTTCAAGTATGTACTATCAACCATTGCAGCAAATCGAAGCCTATTGCTTGCCACAATATCGAAATCTAAATCATCAGCTATACAACAATGATGGAGGCCAAGCAACTCAATTCTCGGCTCCAACTTCTTCTGACCTTTATTACTGCACTTTGGAGTCGTCCTCTGCAGCTGGAAGTTTCGCCGTTTACAACTCTCCTTCAACTGTTAGTTTCTCGCCTAACGATAGTCCAATGTCGCAGCAAGAATCTCAGTCTTATCCATCTGATAAGTATCATTCCCCTGACAATACCTATGGCTCGCCAATGAGTGGATCATGCATAACCGAAGATTTAAGTAGCTTCAAACACAAGCTTAGAGAGTTGGAAAGTGTAATGCTTGGTCCTGACTCTGATAATCTTGATAGTTACGACAGTGCTATCAGCAACGGAACCAATTTTGCTTCGCTTGAAATGGACAGTTGGAGACAAACTATGGTAGCAATTTCGAGCAAAAATCTAAAGCACATCCTTACTGCATGTGCCAAAGCAATAGCAGACAATGATTTGCTAATGGCGCAATGGTTGATGGACGAATTACGGCAGATGGTGTCGGTTTCTGGTGAACCGATTCAAAGATTGGGAGCATACATGTTGGAAGGACTCGTTGCACGGTTGTCTGCATCCGGGAGTTCAATCTACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCCGAGCTTCTTTCTTACATGAACATACTTTACGAGGTTTGCCCTTACTTCAAATTTGGTTACATGTCTGCAAATGGAGCCATTGCAGAAGCCATGAAAAATGAAGCCAGAGTTCATATAATCGATTTCCAAATTGCTCAAGGAAGCCAATGGATTTCGTTGATTCAGGCTTTTGCAGCTAGGCCCGGGGGACCACCACACATCCGGATTACAGGTATTGATGATCCGACATCAGCTTATGCCCGTGGAGGTGGACTACATATAGTTGAAAAGAGGTTATCAAAGCTTGCTCGGCACTTCAAGGTGCCATTTGAGTTTCACGCTGCAGCTATCTCTGGTTGTGATGTTCAACTGCATAACCTTGCAGTTCGGCCAGGGGAAGCTCTGGCCGTAAATTTTGCATTCATGCTACATCACATGCCTGATGAGAGTGTCAGCACTCAGAATCATAGGGATAGGCTTTTAAGGTTGGTTAAGAGCCTATCCCCGAAAGTCGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCGGCATTCTTTCCACGTTTTCTCGAAACTATGGACTATTACACAGCAATGTTCGAGTCAATAGATGTGACTCTTCCGAGAGAGCATAAAGAGAGGATCAATGTTGAGCAGCATTGTTTGGCAAGAGATTTAGTTAACATCATAGCTTGTGAAGGGGTCGAGAGAGTGGAACGACACGAGCTGCTAGGGAAGTGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTCTGAGTTCTTTGGTGAATGGTACAATAAAGAAATTGCTTGAAAACTACAGTGATAGATATAGACTTCAAGAAAGAGATGGAGCTCTATATCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1635 0.4336 MQASEQHRSSSMYYQPLQQIEAYCLPQYRNLNHQLYNNDGGQATQFSAPTSSDLYYCTLESSSAAGSFAVYNSPSTVSFSPNDSPMSQQESQSYPSDKYHSPDNTYGSPMSGSCITEDLSSFKHKLRELESVMLGPDSDNLDSYDSAISNGTNFASLEMDSWRQTMVAISSKNLKHILTACAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQIAQGSQWISLIQAFAARPGGPPHIRITGIDDPTSAYARGGGLHIVEKRLSKLARHFKVPFEFHAAAISGCDVQLHNLAVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3512 544 MobiDBLite consensus disorder prediction 78 107 - -
Mtr5g3512 544 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 544 - -
Mtr5g3512 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 544 IPR005202 -
Mtr5g3512 544 Pfam GRAS domain family 174 544 IPR005202 -
Mtr5g3512 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3512 Mtr-Chr5 43891857 43895261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3512 12 544 GRAS Transcription Factor Family AT5G48150 65.492 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr5g3512 GRAS 2.4e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3512 - - gmx:100808300 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3512 5 43891857 43895261 Mtr5g3512 5 43891857 43895261 ECH