Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3499 ATGACACAAGCAAGCATGTCCTTAGAATCAGATGGTGCCAACATAGAACTTGGTGCTAGCTTACTCATTACTACCACCACCACCACTACTACCAGCAGTAGCAAGTACAACAAGAAATGGCGTAAAAGTTTATACATAGGGTTCCTTATCTCCTTGAAGAAACCTACAACTTCTACTGAAAACTACCAAGAATCTCCTCCACCATCACCAATCTCTTCAGTACCATACACTTCATTGCCTCCTACTCCTCCTGCTAGAACCTCCTCTGCAAAATCTTCTGTTGGTATTGATATACCCTCACATACTCAAGAGGGGGATATTGCTGAAATTGTGAAAAAGAAGGACTTGAAATCTCTTCTTGAGCTTGGTGGGATTGGCATAGTTTGTGATTTTCTTCATGGTCAAAGTCAACACTCATCAAAGAAAATCACTAGGAACCTTGGAGTAAGCTTCTCTGGCATTCTATGGAATAGCTGCAAGCACAATCTTTACACAATTTCAATGCTGCTGATTTCAGCCTTTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCCAAATATGGTTGGCATGATGGTGTTGCCATGGTGTTCGCTCTTCTACTTCTGATTGCATTCTCTTCAATAACTAACTTTTGCCGTGAGCGGAAAATGATGAAGCTTGCAAAGAAAAAAGGTCAGTGGAAATTCAATGTTAAAAGACGTGAAGCGTCCAAACCTGTGCCTCTCACCGTATCTGATATTGTGGTGGGTGACATGGTCTATTTGAGTCCCCATGATGAGGTTCCTGCAGATGGTTTGCTAGTGAGTGGTGACACTGACATCCTTGTGCTGTCTGAGGGAATGAAAAATGAAAAAATTGATTGTGAGGAGAACCCATTTCTTATAGCTGGCTCAAAGGTGATTGAAGGTCATGGATGTATGATTGTGACATCCGTTCCAAACAATTCGAATTCGACAGAGATGAAGGGCTCAATGGGGTATCATCCTAAAAAAAGAGCACTTTTGGAAAGTCTAATTGAGAAGCCAATTTCCTACCTTGACAAAGCTTCTCTTTTTGTCTTTACACTTGTTGCACTTGTGTTGTTCATTCGCCTAATATGTAAAAAAGATGTGGATGGAGGAGGGTTGCCAGATATTAAAGGTAATAATGTTTCAGTTGGCTTATTGACACAACTCCTTGAGAATATTTTCTCGAGACCACGAGGAAGGATTTCCATTTTGGCAGGTCTTTTTAGTGTTGTAATACTGTGTGTGCAACATGGAGTGCCAATTATGGTTACTCTTTCTCTCCATTACCAGAATGATAAGGTAGTGTTGGATCAAGAAGCCGTTCTTAATGATTTGTCAACTTGTACAACAATGGGGTTGGTAACTGTCATCTGCATCGATGTATCTGGCGAGATAATATCAAAACCAATGGAAGTTAACAAAATTTGGATAGGGGAGGCGGAGACAGATATCAACAAGGTTGAGGAATCAGAAACATGTCCAGTTGTACTTGACAAGCTTAAACAAGGAGTTGCTTTATCAGTTCTTGCATCAAGACTGTCTCCTTCGCCTATGTCCAATTCGTTTGTTTCCTTGGCAGAAAAAACATGGGAAATGGACATTGAATCTTTCAGAGAAAATTTTCACATTCTTGAACATGGCAAACTGGATTCTAACCAAGAGGGTGGTGGAGTTTTGGTGAGAAACGTTAGGGACAATGAACAAGTTATGCACTTGCACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGTTCACAGTACTACGATAGGCAAGGAAAATGTCATTCCATGGAAAATCAGAAAATCAAATATGGACAGGTGATTCAAGATATGGAGGATAATGGCCTTAAGCCAATTGCACTTGCTTATAGACAAACACAAGTGCAAGAACTCAAGCAAGATGAATTGACCTTGTTGGCACTGGTAGGTCTCAAATACAAGTGTCGAGAATCGACAAAAAAAGCTTTGAAAAATCTGCAAAATGATGGAATACATATCAAATTGGTCTCGACGGATGACATCATGGTAGTGAAAGAAACAGCTTGTGAACTGGGAATAGAAGTGCCGGTAGACGGACACCTTGAAGGAAAAGAACTTCAATACTTGAATGGCAAAGCTAGATTAGTTAAACTGGGTAAAGCCATTGCAATGGGAAGCTTCAGTCCTGAAGACAAGCTTCTCATGGTACGATGTTTGCAAGATAAAGGTGATGTGGTTGCATTCATTGAAACACAACAGTTGATGACTAATCATACTTCAGAAGTTCTAAAGATAGCTGATGCAGGAATAGTTCATAACTCTCTAAGCAAATTAATTGGTAGTAGAGAGGGTTCTGGTTTATCTATCACATGTTTCAGTGCGCTGAAACCAATTGTGAAGGCTGGCAGAAGTGAATATCACAATATTCAAAAGTTCATTCAACTTCAACTGACAGTTGGTATATCAGGGCTACTCATAACCTTGATTACAACAATATTCACAGGAAATTCTCCTCTAACAGAAATCCAATTGATTTGGGTGAATGCGCTAATGTGTCTTCTGGGTGGCCTAATGATGGTGATGGAATTAAGTAGTGAGGAAGAGCTTGTCAAACAACCATATGATAGGAATCAACTGATTATAACCAAGAAAATATGGAAAAACATTGTTTTTCAGGTTTTGTATCAGGCTTCTGCCTGCATAATACTTGAATTTGGGGGACATGTAACTGACAGGGAAAAACAAGTAAGGAAAACCATGATCTTCAATACATTCTTCTTATGCCAGCTGTTCAATCTGCTCAATACCATGGGTTTTTTGAAAGCAGAAGTTTTTAAGATTGATGTTCAGAAGCACTGTTTCTCAGTGGCTTTAGGTAGTTGTTTTGTTATGCAGGTAGTGGTTATTGAGTATGCAAAAGGCCTGGCATATTGCATGCGGCTGAATGCCACTAGATGGGCCATCTGTGTCATGGTTGGTGCTTTTTCATGGGTACTTGAATGGATCTTGAATAAGATTCTTTCAGTTTTTTTCAGCAACACTGATACTTCACCCCTGGACCCTCCAGAGTCTACCCCACAACCTTTATTCTATTTTTATTGCGGGCTTCCATTTATGATGCTTCTTTTGTTCCCTTTAGGACTAGCAGGTATTAAATTTGATTGA 3159 0.4001 MTQASMSLESDGANIELGASLLITTTTTTTTSSSKYNKKWRKSLYIGFLISLKKPTTSTENYQESPPPSPISSVPYTSLPPTPPARTSSAKSSVGIDIPSHTQEGDIAEIVKKKDLKSLLELGGIGIVCDFLHGQSQHSSKKITRNLGVSFSGILWNSCKHNLYTISMLLISAFLSFATEFKQEGPKYGWHDGVAMVFALLLLIAFSSITNFCRERKMMKLAKKKGQWKFNVKRREASKPVPLTVSDIVVGDMVYLSPHDEVPADGLLVSGDTDILVLSEGMKNEKIDCEENPFLIAGSKVIEGHGCMIVTSVPNNSNSTEMKGSMGYHPKKRALLESLIEKPISYLDKASLFVFTLVALVLFIRLICKKDVDGGGLPDIKGNNVSVGLLTQLLENIFSRPRGRISILAGLFSVVILCVQHGVPIMVTLSLHYQNDKVVLDQEAVLNDLSTCTTMGLVTVICIDVSGEIISKPMEVNKIWIGEAETDINKVEESETCPVVLDKLKQGVALSVLASRLSPSPMSNSFVSLAEKTWEMDIESFRENFHILEHGKLDSNQEGGGVLVRNVRDNEQVMHLHWSGAASTILEMCSQYYDRQGKCHSMENQKIKYGQVIQDMEDNGLKPIALAYRQTQVQELKQDELTLLALVGLKYKCRESTKKALKNLQNDGIHIKLVSTDDIMVVKETACELGIEVPVDGHLEGKELQYLNGKARLVKLGKAIAMGSFSPEDKLLMVRCLQDKGDVVAFIETQQLMTNHTSEVLKIADAGIVHNSLSKLIGSREGSGLSITCFSALKPIVKAGRSEYHNIQKFIQLQLTVGISGLLITLITTIFTGNSPLTEIQLIWVNALMCLLGGLMMVMELSSEEELVKQPYDRNQLIITKKIWKNIVFQVLYQASACIILEFGGHVTDREKQVRKTMIFNTFFLCQLFNLLNTMGFLKAEVFKIDVQKHCFSVALGSCFVMQVVVIEYAKGLAYCMRLNATRWAICVMVGAFSWVLEWILNKILSVFFSNTDTSPLDPPESTPQPLFYFYCGLPFMMLLLFPLGLAGIKFD* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3499 1052 Gene3D - 473 645 IPR023299 GO:0000166
Mtr5g3499 1052 MobiDBLite consensus disorder prediction 57 96 - -
Mtr5g3499 1052 PANTHER CATION-TRANSPORTING ATPASE PLANT 81 1023 - -
Mtr5g3499 1052 PANTHER CATION TRANSPORTING ATPASE 81 1023 - -
Mtr5g3499 1052 Gene3D - 788 1008 - -
Mtr5g3499 1052 Pfam Cation transporting ATPase, C-terminus 835 1002 IPR006068 -
Mtr5g3499 1052 SUPERFAMILY Calcium ATPase, transmembrane domain M 164 1009 IPR023298 -
Mtr5g3499 1052 Pfam E1-E2 ATPase 235 365 - -
Mtr5g3499 1052 MobiDBLite consensus disorder prediction 68 82 - -
Mtr5g3499 1052 SUPERFAMILY HAD-like 611 853 IPR036412 -
Mtr5g3499 1052 SUPERFAMILY Calcium ATPase, transduction domain A 234 320 IPR008250 -
Mtr5g3499 1052 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 474 655 IPR023299 GO:0000166
Mtr5g3499 1052 Gene3D - 646 776 IPR023214 -
Mtr5g3499 1052 Gene3D - 275 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3499 Mtr-Chr5 43783658 43787501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3499 73 995 Primary Pumps ATPases AT3G63380 32.205 8.62e-129 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3499 K01537 - gmx:102661547 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3499 5 43783658 43787501 Mtr5g3499 5 43783658 43787501 ECH