Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3493 ATGACATTTAAGCGCAGAAATGGAGGCCGTAACAAACATGGTCGTGGCCATGTCAAATTCATTCGTTGCTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGGCTATCAAGAGGTTTCTTGTTAGGAACATTGTTGAACAAGCTGCAGTTAGAGATGTACAAGAAGCTTGTGTCTATGACCAGTACACTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTGTTTCATGTGCTATCCATTCTCATGTTGTGAGGGTTAGATCTCGCACTGATAGGAGGAAGCGTGACCCTCCACAGCGTTTCATTAGGCGCAGGGATGATGCCCCAAGGCCGGGTCAGCCTGGTCAAGCGCCCCGCCCTGCTGTAGCTGGAGGAGCTCCTGTCCGTACCTAA 393 0.4936 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAVAGGAPVRT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3493 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Mtr5g3493 130 MobiDBLite consensus disorder prediction 86 130 - -
Mtr5g3493 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Mtr5g3493 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 - -
Mtr5g3493 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Mtr5g3493 130 MobiDBLite consensus disorder prediction 90 110 - -
Mtr5g3493 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3493 Mtr-Chr5 43749242 43751820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3493 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.74e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3493 K02976 - gmx:100305706 220.32