Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3491 ATGAAGAAGGAAGATTCAACCACCCTGTTCATCAGTAAACTCATTTTCTTCTCCTTCTTACAGTTTCTCACCTCTTTCTCAGTCTCATATTCTTCAACTTTCCCATATGAAGCACTTCCCACAAAATCAGGTTACCTACCAATAAGTCCAACCTCCACTTCCTCCATTTTCTACACATTCTATGAAGCACAGAACTCCACTTCACCTCTCTCACAAACTCCACTTCTCATTTGGCTTCAAGGTGGTCCTGGCTGCTCCTCCATGGTCGGCAACTTCTATGAACTTGGACCTTATCTTGTCACCAATTCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTGTTTTTCTTGATAATCCCATTGGAACTGGCTTCAGTGTAGCTTCAACACCGCAAGAGATTCCAGCTGATCAAACTGCGGTCGCAGAACATCTTTTTGCTGCTATAACAAGGTTTGTTCAACTTGATCCTGTTTTCAAACATCGTCCTATTTATATTACCGGTGAAAGCTATGCTGGAAAGTATATTCCTGCAATAGGATACTATATTTTGGAGAAGAATACTAAGTTGAAAAACACTGAAAGAGTGAATTTAGCTGGTGTGGCAATTGGTAATGGACTAACAGACCCTGTCACTCAAATGGTTACTCATGCTGATAATGCTTATTATGCTGGATTGATCAATCAGAGGCAGAAGAATGAGCTGGAAAAACTTCAACTTGAAGCTGTTGAGTTAGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGAGAAGCCGTGTTTTGGATCTGTTGCAAAACATGACAGGGTTTGCTACTTTGTATGATTATTCGCGGAAAGTTCCTTATGAAGATTGGATGGTTGCTCAGTTCTTGAATATCGCCGAGGTGAAGAAGGCCTTAGGGGTGAATGTTGATGAATCATTTGTTTATGAGAAATGTAGTAAAATTGTTTGGGCTGCATTGCATGCTGATTTAATGAAAAGTGTAAAGTATATGGTAGGGAAGTTGTTGAAGGAGAAGATGAGGGTGTTGTTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTTGTTCAAGTAGAGGCTTGGGTGAAGACTATGAAGTGGGAATGGATTGAGGATTTTGTGAATGCCGAGAGGAAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCACTTACAAATGTTGTGGTTTTGGGGGGTGGTCATCTTTTGCCTGCTGATCAACCTTTGAATTCTCAAGCTATGATAGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTCTGATCGAAATGATGTATCGAGAAATTCTGTGTATGATGGATGA 1368 0.4108 MKKEDSTTLFISKLIFFSFLQFLTSFSVSYSSTFPYEALPTKSGYLPISPTSTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMVGNFYELGPYLVTNSLTLQPNPGAWNRIFGLVFLDNPIGTGFSVASTPQEIPADQTAVAEHLFAAITRFVQLDPVFKHRPIYITGESYAGKYIPAIGYYILEKNTKLKNTERVNLAGVAIGNGLTDPVTQMVTHADNAYYAGLINQRQKNELEKLQLEAVELVERRNWSEATDARSRVLDLLQNMTGFATLYDYSRKVPYEDWMVAQFLNIAEVKKALGVNVDESFVYEKCSKIVWAALHADLMKSVKYMVGKLLKEKMRVLLYQGQRDLRVGVVQVEAWVKTMKWEWIEDFVNAERKIWKVNGEVAGYVQKWKSLTNVVVLGGGHLLPADQPLNSQAMIEDWVLEKGLFGSVSDRNDVSRNSVYDG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3491 455 Gene3D alpha/beta hydrolase 25 440 IPR029058 -
Mtr5g3491 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 440 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 SUPERFAMILY alpha/beta-Hydrolases 40 433 IPR029058 -
Mtr5g3491 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 404 417 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Mtr5g3491 455 Coils Coil 233 253 - -
Mtr5g3491 455 Pfam Serine carboxypeptidase 40 432 IPR001563 GO:0004185|GO:0006508
Mtr5g3491 455 PANTHER CARBOXYPEPTIDASE 26 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3491 Mtr-Chr5 43739920 43742153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3491 298 432 Calmodulin-binding Proteins AT2G22960 24.265 6.73e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3491 K09645 - gmx:100780822 660.218