Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3490 ATGGAAGCAAATAAAGAGGAAGCACTTAAGGCAATTGAGAATGCCGAGAAGAGATTTTCTCAAAGAGATTTTGCAGGAGCGAAAAACTATGCTTTGAAGGCTAAAGAGCTTTGTCCTGAGTTGGAGGGTATATCTCAAATGGTGTCAACATTTGATGTTCATATTGCTTCTGAGTTCAGACATAATGGCGAAGTAGATTATTATTCGGTTCTCGGACTAAAACCTACTGCGGATAAAGAGGCTGTCAAAAGACAGTATAAGAAGTTGGCAGTGTTGCTTCATCCAGATAAGAACAAATGTGTTGGAGCTGATGGTGCATTTAAGCTTGTTTCTGAGGCGTGGACTTGGCTCGACAATTCCATGCGCAGTTCTTACAATCTCAAGAGAAAATATTCTTCTTTTCATGCTCCAGGTTATAACAAATGTTCCAATTTGCCGGCCTCACGTAGTAAACTTGACACCTTTTGGACAATCTGTACCGCTTGTAAGGTCCAGTATGAATATCTGCGCAAGTATGTGAATAAAAAGCTCTCTTGCAAGAACTGTCGTGGCACTTTTGTTGCTGTAGAAACTGGGGCAGCCCCAGCAAATGGTTCGTTTCCTTATAGTCCTTTGCCATATGTGCCAGGAAATGGTTATGGAAATCATTCATTTGACGGGGTTACGTATGTTCCAACTAATGCTGCCTATTTTAATGGGAATGGGGTCACAGGATACCATTCTGGACACGGTTACGATTATGTTTCAAATGTTTCGTTTCAGCTGGGATCTGCAGGACTTATCCATCAAAATGGATCGGCGACTACCTTACCTGCTGATTCTGTTTATCGGGTCAATGGAAATGCGAAGAGGGGAAGACCAAAGGTCAAATCAGGAGCCAATGGAAGGCCTCCAATGGCAGAGACTGTCGTTAATATAAACTCACATGTATTGTTCTCCTGTAATAAACCACAGGAAGTTATGCCAGATAGACCTTACAAGAAACGTAAAGTTACGGTGGGAGCCAGTTTCAGAAATGGTTATGATGCAAAAGGGTCAAAATGTGCTTTAGAAGCAGTAGTGCCGAAAGGAAATGACAACATTGGACCAGGCCAGAAGGTTGTCGTCAAAAATGAAGTTCAAACCAAACACTGTTTCATGCCACCTGCATTTGACGCGAGAAAATTATTGATCGAGAAGGCCAGGACAGTTATTAGGAAGAAACTGGAAGAGATAAAGTTATCATCTGAAGCTGCAACTCTGAAAGAAAAAGAAAAGGCACAAGTTGATGTGTGTCAAGTCAAAAGAGAGACATGTAGGAAAGCATCTTTGAATGTTTCAGGTCTTCAATTGGAGCCACACGGGAAAGCTGGTCCGATCTCAATAACTGTCCCAGATTCTGACTTTCACGACTTCGATAAAGATAGGACAGAGGAATGTTTCAAGCCAAAGCAAATATGGGCCTTATATGATGAAGAAGACGGAATGCCGCGATTGTATTGTCTGATCCGCGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACCTGAGTTCCAAAACAGATAGCGAATTTGGCTCAGTAAACTGGCTTGAATCAGGTTTTACCAAATCTTGCGGAAATTTCAGGGCTTGGACTTCAGATATTGTTGACCAAGTTAACGTATTTTCCCATGTCCTTGGCCGCGAGAAAGCTGGTCGAGGTGGTTGTGTTCGTATTTATCCGAGAAGTGGAGATATTTGGGCTGTTTATCGAAACTGGTCACCCGATTGGAACCAATCTACACCGGACAACGTAAGGCATGAATATGACATGGTAGAGGTGCTGTATGATTACTCTGAGGACCTTGGTGTATGTGTTACTCCACTTATTAAGTTAGCAGGATTCAAAACAGTATACAAAAGGAATCCAGACCAAGGTGCTGAAAAATGGATACCAAGAAGAGAAATGGTACGACTTTCGCACCAAGTTCCATCTTGGTTGCTGAAAGGGGAGGAAACTAATTTGCCTGATCGGTGTTTTGACCTTGATCCGGCTGCAACTCCAGACGGTCTTCTTCATACAGCTGCTGCTATGGAAGCAAAGGCTTTGTAG 2079 0.4228 MEANKEEALKAIENAEKRFSQRDFAGAKNYALKAKELCPELEGISQMVSTFDVHIASEFRHNGEVDYYSVLGLKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNSMRSSYNLKRKYSSFHAPGYNKCSNLPASRSKLDTFWTICTACKVQYEYLRKYVNKKLSCKNCRGTFVAVETGAAPANGSFPYSPLPYVPGNGYGNHSFDGVTYVPTNAAYFNGNGVTGYHSGHGYDYVSNVSFQLGSAGLIHQNGSATTLPADSVYRVNGNAKRGRPKVKSGANGRPPMAETVVNINSHVLFSCNKPQEVMPDRPYKKRKVTVGASFRNGYDAKGSKCALEAVVPKGNDNIGPGQKVVVKNEVQTKHCFMPPAFDARKLLIEKARTVIRKKLEEIKLSSEAATLKEKEKAQVDVCQVKRETCRKASLNVSGLQLEPHGKAGPISITVPDSDFHDFDKDRTEECFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLSSKTDSEFGSVNWLESGFTKSCGNFRAWTSDIVDQVNVFSHVLGREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNQSTPDNVRHEYDMVEVLYDYSEDLGVCVTPLIKLAGFKTVYKRNPDQGAEKWIPRREMVRLSHQVPSWLLKGEETNLPDRCFDLDPAATPDGLLHTAAAMEAKAL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3490 692 PRINTS DnaJ domain signature 68 86 IPR001623 -
Mtr5g3490 692 PRINTS DnaJ domain signature 86 101 IPR001623 -
Mtr5g3490 692 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mtr5g3490 692 Pfam DnaJ domain 66 125 IPR001623 -
Mtr5g3490 692 PANTHER BNAC03G44070D PROTEIN 1 684 - -
Mtr5g3490 692 CDD DnaJ 66 114 IPR001623 -
Mtr5g3490 692 ProSiteProfiles dnaJ domain profile. 66 135 IPR001623 -
Mtr5g3490 692 SMART dnaj_3 65 122 IPR001623 -
Mtr5g3490 692 PANTHER BNAC03G44070D PROTEIN 1 684 - -
Mtr5g3490 692 SUPERFAMILY Chaperone J-domain 62 119 IPR036869 -
Mtr5g3490 692 Pfam Domain of unknown function (DUF3444) 454 661 IPR024593 -
Mtr5g3490 692 Gene3D DnaJ domain 52 125 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3490 Mtr-Chr5 43733156 43736652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3490 4 288 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.582 1.77e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3490 - - gmx:100792639 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3490 5 43733156 43736652 Mtr5g3490 5 43733156 43736652 ECH