Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3468 ATGAATAGGATGTTTTACTCTCCATTCGAAGTGGAATCTGTGGGTTACGTCGCTCAATGGAGACTCAGTTTTAAGAGCATGAATATGATTCCCCACAGCTTTATCCACACGTCCGAAGCTTTCAAGATCTCTAAATGGAATTGGCACATATCATTCTCGAGGGATTCCCTTTCTAGTCCGGTTGCTATCAAATTATATGCAGAAGAGTCCACAAATAATCCACCAATTGCATCTTTCAAATTTCGTATTCTTGACTCTATCGGAAAAAATGGAATAACCTTCGCAGAGACGGAAGAAAAAGACAAGCTTTTCAGTAGCGAAACTGATGCTTTTAACTGGGAGGTTGATGTTCAACTACCTGATGTTACAACATCCTGTGTTGAAGTTGAATTCCTAGATCTCAAGACTTCAAACCCAAATGATGGAGAAACTAACTCAACTAGGAAAAGATCAACAACCCTTGTTCGAATGTTAAGAGAAAGTATCCACACTGACGCTACAATCAAGCTCGGATCATCGGATAAAATCATAAGAGTTCATCGAGCTGTTCTTGCTGCCCGGTCACCTATTTTTGAATACATGTTTGCAGAAGATTCTAAGGAGAATAACATGCTTGTTATAAATATCTCAGATATGTCTCCTGAAGTTTGTCAAGCATTTATAGATTATCTATATGACAACATCGACGATGAAGAACTTGCGGATCATAGTTTCGAGCTATTGGTTGCTGCTGAGAAATATGGCGTTATTGACTTGAGAGAGGAGTGTGAAAAGAATCTTCAAGAAGATATCAACAGAAAAAATATACTTGAGAGGCTCCATGCAGCATATTTCTATCAATTGCCCTACTTGAAGATTAGTTGCGCTCAATATTTAGTGGAATTTGGTAAAATACATGAAATCTGGGATGATTTTCTTGCCTTCCTAAAATTGGCAGATGACGATGTAATTTGCGAAATTTTTCGTGAATTTCTTCCTTAG 981 0.3792 MNRMFYSPFEVESVGYVAQWRLSFKSMNMIPHSFIHTSEAFKISKWNWHISFSRDSLSSPVAIKLYAEESTNNPPIASFKFRILDSIGKNGITFAETEEKDKLFSSETDAFNWEVDVQLPDVTTSCVEVEFLDLKTSNPNDGETNSTRKRSTTLVRMLRESIHTDATIKLGSSDKIIRVHRAVLAARSPIFEYMFAEDSKENNMLVINISDMSPEVCQAFIDYLYDNIDDEELADHSFELLVAAEKYGVIDLREECEKNLQEDINRKNILERLHAAYFYQLPYLKISCAQYLVEFGKIHEIWDDFLAFLKLADDDVICEIFREFLP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3468 326 SUPERFAMILY POZ domain 152 262 IPR011333 -
Mtr5g3468 326 Pfam BTB/POZ domain 159 262 IPR000210 GO:0005515
Mtr5g3468 326 PANTHER OS08G0495500 PROTEIN 5 326 - -
Mtr5g3468 326 Coils Coil 253 273 - -
Mtr5g3468 326 PANTHER OS08G0495500 PROTEIN-RELATED 5 326 IPR044714 -
Mtr5g3468 326 CDD BTB_POZ_ZBTB_KLHL-like 163 247 - -
Mtr5g3468 326 SMART BTB_4 164 264 IPR000210 GO:0005515
Mtr5g3468 326 ProSiteProfiles BTB domain profile. 164 227 IPR000210 GO:0005515
Mtr5g3468 326 Gene3D Potassium Channel Kv1.1; Chain A 136 294 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3468 Mtr-Chr5 43522391 43524306 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr5g3468 BTB 3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3468 K10523 - oeu:111395792 257.684