Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3464 ATGAATGATTATGCTTATGCATACAAAGTTGAAACCATGAATCGTCTAGTTCAATGGAAAATTCACAATTTATCAACATGCACTTATATCAAAGCTGATCCATTCAAAATAGCCATGTGGAACTGGCATTTATCAGTGGAAAAGAATTGTGGTTTACGTATTGAATTATATCCAGAAATGTCTAAAACAATCGCGCACAATCCTCCAATTGCATCTTTCATAGTTAGGATTCTTAGTTATGCTGGAAATAGCAAAATCTTGACTCAATCAGAAATAAAAGATAAACCTCTTAGCAATAAGGATAGCTTTGTGTGGGAGATAGGGGTTCCATTACCTGGAAAATTCATAATTGACATTGAGTTTCTGGATTTGAAAACTACATGTCCAAAGGGTGGGGAAGCTGGCTCTATTTGGCCTAGCGGATTTATGCAGCAGAGACAAAATGCAGCGGCCCTTGAATCCCTAGGTCGAATGATAAGAGAAGATATCTATACAGACATAACAATCAACGTCAATTCCGAGGGAAACATAAGAGCTCATCGAGCTGTTCTGTCTTCACAATCATCTGTGTTTCGCAGCATGTTTTCACATAATGTTAAGGAGACTGATTTGTCTACGATAAACATCACCGACATGTCAATTCAATCTTTTCAGACGTTTATAAATTTTCTTTATGGAAATGTTAATGATGAAGAGTTTCTTATGCATAGATTGGACCTATTACATGCAGCTGACAAGTATGACATCTATGAGTTAAGAGAGGCATGTCAAAAGAGTCTTCAAGAAGATATTGATCCAAAAAATGTACTTGAGAGACTCCAAATTGCATCTTTGTATCAATTAACAACATTGAAGTTTAGTTGTATGCAATATCTTGTGAAATTTGGCAAAATATATGATATTCAGGGTGATTTAAGTTCATTCTTGCAAACTGCTGATAGAGATTTGATATGCGAAGTCTTCAATGAAATTCTTGATGCTTGGAAAAAGTGA 993 0.3535 MNDYAYAYKVETMNRLVQWKIHNLSTCTYIKADPFKIAMWNWHLSVEKNCGLRIELYPEMSKTIAHNPPIASFIVRILSYAGNSKILTQSEIKDKPLSNKDSFVWEIGVPLPGKFIIDIEFLDLKTTCPKGGEAGSIWPSGFMQQRQNAAALESLGRMIREDIYTDITINVNSEGNIRAHRAVLSSQSSVFRSMFSHNVKETDLSTINITDMSIQSFQTFINFLYGNVNDEEFLMHRLDLLHAADKYDIYELREACQKSLQEDIDPKNVLERLQIASLYQLTTLKFSCMQYLVKFGKIYDIQGDLSSFLQTADRDLICEVFNEILDAWKK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3464 330 ProSiteProfiles BTB domain profile. 165 225 IPR000210 GO:0005515
Mtr5g3464 330 CDD BTB_POZ_ZBTB_KLHL-like 164 247 - -
Mtr5g3464 330 Gene3D Potassium Channel Kv1.1; Chain A 142 294 IPR011333 -
Mtr5g3464 330 SMART BTB_4 165 264 IPR000210 GO:0005515
Mtr5g3464 330 SUPERFAMILY POZ domain 150 262 IPR011333 -
Mtr5g3464 330 Pfam BTB/POZ domain 160 262 IPR000210 GO:0005515
Mtr5g3464 330 PANTHER OS08G0495500 PROTEIN 6 329 - -
Mtr5g3464 330 PANTHER OS08G0495500 PROTEIN-RELATED 6 329 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3464 Mtr-Chr5 43484711 43486556 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr5g3464 BTB 4.2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3464 K10523 - gmx:100790186 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3464 5 43484711 43486556 Mtr5g3464 5 43484711 43486556 ECH