Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3462 ATGTCTGCCTTTGTTGGAAAGTATGCAGATGAGCTTATCAAGAATGCCAAGTATATAGCCACCCCTGGCAAGGGTATCTTGGCAGCAGATGAGAGCACTGGAACTATTGGCAAGCGTCTAGCAAGCATCAACGTTGAGAACATTGAGGCTAACCGTCAAGCCCTCCGTGAACTTCTCTTCACCTCTCCCAATGCACTCCAATACCTCTCCGGTGTCATCCTCTTTGAGGAAACTCTTTACCAGAATTCCTCCGAGGGGAAGCCTTTTGTTGAAATCCTCCAAGAGAACAATGTCATACCAGGCATCAAAGTTGACAAGGGTGTTATTGAATTAGCTGGAACAAATGGTGAAACAACAACACAAGGTTTTGACTCCCTTGGAGCTAGATGCCAGCAGTATTACAAAGCTGGAGCGCGGTTTGCCAAGTGGCGTGCGGTCCTCAAGATTGGTCCCAATGAGCCCTCTGAGTTGTCTATCCAGCAAAATGCACAGGGCTTGGCTCGCTACGCCATCATTTGCCAGGAGAATGGCCTTGTGCCTATTGTTGAGCCTGAGATTTTAACCGATGGATCTCATGACATCGCCAAATGCGCCGCTGTCACTGAAACTGTACTTGCAGCTGTTTACAAGGCACTGAATGATCAGCATGTCCTTCTTGAAGGAACTCTTCTCAAGCCTAACATGGTTACCCCAGGTTCTGATAGTCCAAAGGTAACACCTGAGGTGATTGGTGAGTACACAGTTACTGCGTTACGCAGAACTGTCCCAGCCGCGGTACCAGGGGTTGTATTTCTGTCAGGTGGACAAAGTGAAGAACAGGCTACACTAAACCTCGATGCAATGAACAAGCTAGATGTTGTGAAGCCATGGACACTTTCATTCTCATTTGGGAGAGCACTGCAGCAAAGCACACTCAAGACATGGGCTGGAAAGAAAGAGAATGTTGGCAAAGCTCAAGAGGTATTTCTGGCAAGATGCAAGGCCAATTCTGAGGCTACTCTTGGGAAATATGGTGGTGGAAGTGGAACTGGGTTGGCTTCTGAGAGTTTATATGTTAAGGACTATAAGTATTAG 1074 0.4721 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQNSSEGKPFVEILQENNVIPGIKVDKGVIELAGTNGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGSHDIAKCAAVTETVLAAVYKALNDQHVLLEGTLLKPNMVTPGSDSPKVTPEVIGEYTVTALRRTVPAAVPGVVFLSGGQSEEQATLNLDAMNKLDVVKPWTLSFSFGRALQQSTLKTWAGKKENVGKAQEVFLARCKANSEATLGKYGGGSGTGLASESLYVKDYKY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3462 357 Pfam Fructose-bisphosphate aldolase class-I 11 357 IPR000741 GO:0004332|GO:0006096
Mtr5g3462 357 CDD FBP_aldolase_I_a 9 334 - -
Mtr5g3462 357 Gene3D Aldolase class I 1 357 IPR013785 -
Mtr5g3462 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 5, CYTOSOLIC-RELATED 1 357 - -
Mtr5g3462 357 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 217 227 IPR029768 -
Mtr5g3462 357 Coils Coil 38 58 - -
Mtr5g3462 357 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 1 357 IPR000741 GO:0004332|GO:0006096
Mtr5g3462 357 SUPERFAMILY Aldolase 3 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3462 Mtr-Chr5 43471690 43473812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3462 1 357 Miscellaneous Gene Families AT3G52930 79.050 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3462 K01623 - gmx:547751 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3462 5 43471690 43473812 Mtr5g3462 5 43471690 43473812 ECH