Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3459 ATGCCTCAAGAGAGTAGCTTACTAAGCTCAATTTTCGCATCTCCATCATCAAAGAGAATATTGAATTTGAAGGGTTCAGTTTTCAACAATAGTGAAGTGAGTGAGGAGATCAATGATCATGAATTGGCTTACAGGAAAGCAGAGGAAGCAGCATCAAGGAGGAATGAAGCAGCAGAATGGCTACGAGAAATGGACAATGTAGCTTCTTCCTCACTCTCCAAACAACCCTCCGAAGAAGAGTTCTGCCTCGCTCTCCGCAATGGCCTCATTCTTTGCAACGTTCTCAACAAAGTCAATCCGGGTGCTATCCTCAAAGTGGTGGACAATCCACTCCCTGCTGTTCAATCTCTAGAGGGTCCAGCTCACTCTGCCATTCAGTATTTTGAGAACATGAAGAATTTTCTTGATGCTGTCAGGGATATGACCTTGTTGACCTTTGAAGCTTCTGATTTGGAAAAGGGTGGTTCATCTAGTAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTATCTGGTGGAGTTGGGGTTTGGAGGTATGGAGGAACTGTCAGGATTATGTCTTTCCCCAAAGAAACTCCTTCTTCCTCTATATTGGGCAGTGAAAGTGCTGACGAGTCCCTTGATGAGTTTCAGTCCTCACAGTATCAACAGTTGCTTGAATTTCTTCATATGTCTCCGGAGGTCTCAATTGAAGAAACCAGAACAGCTAGTGCTCTGAATTTCTTGTTTGATCATTTTGGACTCAAACTTCTCCAGGCTTTCGTTAGAGAGACTGATGAGGCTAAAGATCTACCACTCAATGCAATGGTTATTGATACATTTCTCAGCAAGATAGTAAGGGATTTCTCAACGTTACTTGTTTCTCAAGGCACTCAGCTTGCATTTTTCCTCAAGAAAATATTGAAAAGCGGTGATAGTGGCTGCCTCTCTAAGAGAGAATTTATGGAAGCTATCACATTATATCTTAATCAAAGAAGTAGTTTGACGTCAAATGATTTATCTAAATTCTGCACTTGTGGGGGAAAACGTGAGAGTACTCAGCATAATGTTAATTATTCAGCCAAACAGGCTGAAATAATTGATGCTCAGCAGAAACAACTTGAGGGAATGAAATACTTGTTGGCGGATATAAAAAGGGAAGTCAAACAGATTCAATTTGAATGGGACCAAGAACTGAGCAGGCTCGAGAGTCATATAAAGAGCCTTGAGGGAACCTCCTCTTCCTACCACAAAGTTTTAGAAGAGAACCGCTCTCTTTACAATCAAGTGATAGACCTCAAAGGATCCATTAGGGTCTATTGTAGAGTGAGGCCTTTCTTACCAGGACAATCAAATGGACAATCTACAGTCGATTATATAGGAGAAAATGGAAACATCATGATTGTGAATCCCCTTAAGCAGGGAAAAGATGCTAGAAAAGTATTTTCATTCAATAAGGTGTTCCCGACAAATGCCACACAAGAACAAATATATGTTGATACTCGGCCATTGGTCAGATCGGTTTTAGATGGTTATAATGCATGCATCTTTGCATATGGACAAACTGGCTCAGGGAAAACCTACACAATGAGTGGTCCAGATTTGATGACTGAAGAGACATGGGGTGTAAACTATAGAGCTTTGCAAGACTTATTTCATATATCAAAGGATAGAGCAGATGCAATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTACTAGTCAGTGATGGCTCTAACAGAAGATTAGAAATACGAAACAACTCTCAATTGAATGGTCTGAATGTGCCTGATGCATGTTTGGTTCCGGTTAGTTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAGGAATCGTGCTGTTGGTGCTACCGCTCTAAATGAGCGAAGCAGTCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGAATGGACGTAGTCTCTAATTCAGTTCTGAAGGGTTGTCTACATCTTGTGGATTTAGCTGGAAGTGAGAGAGTGGAGAAATCTGAGGCCGTTGGCGAGAGACTAAAGGAGGCTCAACATATTAACAAATCACTGTCTGCACTTGGCGATGTTATCTCCGCTTTGGCACAGAAGAGTCAACATATTCCTTACAGAAATAGCAAGCTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAGACTTTGATGTTTGTTCATATAAATCCTGAAATCAATGCTCTTGGGGAGACAATTAGCACATTGAAGTTTGCTGAGAGGGTTGCATCCATTGAACTTGGGGCTGCTAAATCTAATAAAGAAACCGGTGAAATCCGAGAGCTCAAGGAAGAGATATCAAATATCAAATCGGCATTGGAGAGGAAGGAAAATGAACTGGAGCAATGGAAAACTGGAAATGCACGGAATGTCACAGAATCTCAGAAACCAAGAGCTGTTTCACCTTTCCGTATGCCCAAATATAGTACCAGTGGCAGCATGAAGCCTGAAAATAGTCAAAGATCCATGGATGATAGAAGCTCTGAGGCTAAAAATTATTCTTCGGGCAAACAAAGAAGGCCAAGATTTCCCTCAACATTTATGGACAAGGACTCCATACCAAAAATGTCTCTTCTGTCTGAAGAAAAGTCAGTGAGCACAGGGAGGGGCAGGTCACCATCACCTCCAATTAGGAGATCAATATCTACTGATAGAGGTTCTGTCATTAAAAGCAAGACCAAAATCGACAATCTAGAAAACCAACCAATTTCGAAGAATCCATTTACAGCTAGAACAGTGCCAGTAAATAAATCTATTGTCACAATGACAATGACACCACATCCACAAGAGCCAGTGAAACACGATTTTGTTTATGAACCTCTCTTTAACGCCCAGAAAGTAAGCTTCAGGAAAGTTCATCGAGAACACGAAGAGCAACAGGTCAAACAACCATTTGCGGCAGTAAGACAAAGTGGTGTTAGGAATAGCAAAGCTGACAATAAGGTCAAGGCAAAACATCATCAACGATCGCCCTTTAGGATTCAAAAGACCGATTTAATACCTAAATTGATTCCTGACATGGATATTACCGGTGAAATCGTGGAGGCGCCTCAAAAGTGTGATTATTCTGAGCCAGAAAATGACTTTACTTTTATGGAGTCTGCAGTGAATGGTGTATTAAGTGTTAAAAAGATGCGTCACAACATCTCAAGGAATTCTCAGAACCATGAATCAAGAAGAATTATGCAAGAAGCTGAACCATTGTCTGCTAGTAAAGTTGAAAACAAACTTTTAAATGTTCAAGGTCGCAATCTTAAGGAAGGAACCAATACATCTATGCATGAATTTAAAAGAAGCCGGTCGACACCACGAGGAAAGTTTTTTGTATTATAA 3384 0.4046 MPQESSLLSSIFASPSSKRILNLKGSVFNNSEVSEEINDHELAYRKAEEAASRRNEAAEWLREMDNVASSSLSKQPSEEEFCLALRNGLILCNVLNKVNPGAILKVVDNPLPAVQSLEGPAHSAIQYFENMKNFLDAVRDMTLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRIMSFPKETPSSSILGSESADESLDEFQSSQYQQLLEFLHMSPEVSIEETRTASALNFLFDHFGLKLLQAFVRETDEAKDLPLNAMVIDTFLSKIVRDFSTLLVSQGTQLAFFLKKILKSGDSGCLSKREFMEAITLYLNQRSSLTSNDLSKFCTCGGKRESTQHNVNYSAKQAEIIDAQQKQLEGMKYLLADIKREVKQIQFEWDQELSRLESHIKSLEGTSSSYHKVLEENRSLYNQVIDLKGSIRVYCRVRPFLPGQSNGQSTVDYIGENGNIMIVNPLKQGKDARKVFSFNKVFPTNATQEQIYVDTRPLVRSVLDGYNACIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALQDLFHISKDRADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLEIRNNSQLNGLNVPDACLVPVSCTQDVLDLMKIGQRNRAVGATALNERSSRSHSVLTVHVRGMDVVSNSVLKGCLHLVDLAGSERVEKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEINALGETISTLKFAERVASIELGAAKSNKETGEIRELKEEISNIKSALERKENELEQWKTGNARNVTESQKPRAVSPFRMPKYSTSGSMKPENSQRSMDDRSSEAKNYSSGKQRRPRFPSTFMDKDSIPKMSLLSEEKSVSTGRGRSPSPPIRRSISTDRGSVIKSKTKIDNLENQPISKNPFTARTVPVNKSIVTMTMTPHPQEPVKHDFVYEPLFNAQKVSFRKVHREHEEQQVKQPFAAVRQSGVRNSKADNKVKAKHHQRSPFRIQKTDLIPKLIPDMDITGEIVEAPQKCDYSEPENDFTFMESAVNGVLSVKKMRHNISRNSQNHESRRIMQEAEPLSASKVENKLLNVQGRNLKEGTNTSMHEFKRSRSTPRGKFFVL* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3459 1127 Pfam Calponin homology (CH) domain 52 172 IPR001715 GO:0005515
Mtr5g3459 1127 CDD KISc_C_terminal 432 764 - -
Mtr5g3459 1127 MobiDBLite consensus disorder prediction 1103 1127 - -
Mtr5g3459 1127 ProSiteProfiles Calponin homology (CH) domain profile. 51 172 IPR001715 GO:0005515
Mtr5g3459 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 800 IPR027417 -
Mtr5g3459 1127 SMART ch_5 53 170 IPR001715 GO:0005515
Mtr5g3459 1127 ProSiteProfiles Kinesin motor domain profile. 434 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 MobiDBLite consensus disorder prediction 876 905 - -
Mtr5g3459 1127 MobiDBLite consensus disorder prediction 797 905 - -
Mtr5g3459 1127 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 29 1123 - -
Mtr5g3459 1127 SUPERFAMILY Calponin-homology domain, CH-domain 45 200 IPR036872 -
Mtr5g3459 1127 SMART kinesin_4 432 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 MobiDBLite consensus disorder prediction 836 853 - -
Mtr5g3459 1127 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 1123 - -
Mtr5g3459 1127 Coils Coil 365 385 - -
Mtr5g3459 1127 Coils Coil 769 803 - -
Mtr5g3459 1127 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 PRINTS Kinesin heavy chain signature 632 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 PRINTS Kinesin heavy chain signature 663 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 PRINTS Kinesin heavy chain signature 712 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 Pfam Kinesin motor domain 440 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr5g3459 1127 Gene3D - 43 172 IPR036872 -
Mtr5g3459 1127 Coils Coil 30 50 - -
Mtr5g3459 1127 MobiDBLite consensus disorder prediction 987 1007 - -
Mtr5g3459 1127 Gene3D Kinesin motor domain 376 764 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3459 Mtr-Chr5 43424310 43433471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3459 425 779 Calmodulin-binding Proteins AT5G65930 43.251 1.51e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3459 K10406 - gmx:100811516 1637.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3459 5 43424310 43433471 Mtr5g3459 5 43424310 43433471 ECH
Mtr3g1562 3 27399694 27409752 Mtr5g3459 5 43424310 43433471 PCT