Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3455 ATGTCTACAAACTTAAATAATCTGTCACTTTTTCACAAAACCTTTTCCCTCACCTTGTTTCTTTTCTCAGTAAATTTTCTTTTCTTTCCATGTTGTAACTCTCTTGATGAACAAGGCCAAGCTCTTATAGCATGGAAGGAGAGTTTAAACACTACTTCAGATGTATTAGCATCTTGGAACCTTTCAAACCAAACACCATGTAATTGGTTTGGTGTGAAGTGCAATTTACAAGGAGAGGTAGAAGAGATAAACTTGAAATCATTGAACTTGCAAGGCTCATCATTGCCTTCAAATTTTCAACCTCTCAAGTCCTTAAAGGTTCTTGTCCTCTCGTCAACCAACATAACAGGAAGGGTTCCAAAAGAATTTGGAGACTATCAAGAGCTCATTTTCATTGATCTCAGTGAAAATTATCTCTTTGGAGAAATCCCAGATGAAATTTGCAGGCTAAGCAAACTTCAAACTTTAGCTCTTCATACAAACTCTCTTGAAGGAAATATTCCATTCAACATAGGAAATTTACCAAGTCTTGTGAACTTGACACTCTATGACAATAAACTCAGCGGCGAAATTCCGAAGAGTATTGGCTTATTAAGTAAGCTTCAAGTATTCAGAGCTGGAGGCAATAAAAACTTCAAGGGTGAGCTGCCATCGGAGATCGGAAGCTGCACCAACTTGGTCATGTTAGGTCTTGCAGAAACCGGCATTTCCGGTAGTATTCCTTCTTCAATAGGGATGCTAAAAAAATTACAGACCATAGCCATTTACACAACTCAGTTGTCAGGCTCTATACCAGAAGAGATAGGGAATTGCAGTGAGTTGCAGAATCTGTATTTGTATCAGAACTCAATTTCTGGTTCAATTCCACCTCAAATTGGTGAGCTCAGAAAGCTTCAGAGTCTACTTTTATGGCAAAACAATATGGTAGGAGCAATTCCAGAAGAGCTTGGAAACTGCAGAGAGCTCAGTGAGATAGATTTGTCAGAAAATCTTCTCACAGGTAGCATACCAATCAGTTTTGGAAAGCTATCAAATCTGCAAGGACTTCAACTGAGTGTTAATCAGTTGTCAGGTATTATACCACCTGAAATTTCAAACTGCAGTTCTTTGATTCAGCTGGAAGTTGACAACAATGCTATTACTGGTGAGATTCCTTCTGTTATTGGCAACTTGAGAAACTTGACTCTCTTCTTTGCATGGAAGAACAAGCTAACAGGAAAAATCCCAAATAGTCTTTCAGAGTGTCAAAATCTTCAGGCACTTGATCTTTCATACAACAACCTAACTGGTTCGATACCAAAACAACTATTTGTGTTGAGGAATCTAACTCAGCTTATGCTTATTTCCAATGATTTGGAAGGATTAATACCACCTGATATAGGTAACTGCACAAGTCTCTACAGATTGAGGTTAAATCAGAATAGATTGGTTGGTACCATTCCATCTGAAATTGCCAACTTGAAGAACTTGAATTTTTTGGACTTGCACTACAATCATCTTGTAGGGGAGATTCCATCTCAGTTCTCTGGTCTTAGCAAACTTGGAGTGCTTGATCTCTCCCACAACAAGCTCTCAGGGAATTTAGATGCTATTTCTAACCTTCATAATCTTGTTTCTTTAAATGTTTCCTTCAATGAATTCTCTGGTGAATTGCCTAACTCACCATTCTTTAGGAAACTCCCTTTCAGTGATCTCACTGGAAATAAAGGTCTTCACATTCCTGATGGTGTTGCAACTCCAGCTAACAGAACAAGAGCCAAATGTCGTGTTAGATTAGATATGGAGATTATATTGCTCATTCTCTTGAGCATCAGTGCAGTACTAATACTTCTCACAATCTATGTTCTGGTTCGTGCTCATGTTGCTGACGAAGCATTCATGAGAAATAACAATTCGGTGACAACTTTGTATGAGAAGTTTGGATTCTTCTCTATTGATAACATTGTCAAGAATTTCAAAGCATCTAATATGATTGACACCACAAATTCTGGAGTTTTGTACAAGGTAACAATTCCAAAAGGCCATATACTTACAGTTAAAAAGATGTGGCCAGAATCTAGAGCTTCTAGTTCTGAAATTCAAATGTTAAGTTCAATCAAACATAAGAATATCATCAACCTTCTTGCTTGGGGATCCTATAAGAATATGATGCTGCAGTTTTATGACTACTTCCCTAGTCTGAGCTCATTGCTTCATGGTTCAGAAAAGGGAAAGTTAGAATGGGATACTAGGTATGAAGTCATCTTAGGCCTAGCTCAAGCACTTGCATATTTGCACCATGATTGTGTGCCTTCCATATTTCATGGAGATGTCAAAGCAACAAATGTGTTATTAGGTCCTGGTTTTCATCCTTACCTTGCTTACTATGGCCGGACAAAAATTGCAAGTGAAAAGGGTGAAAATACTGATGCCAATCCAGTTCAAAGACCTCCCTACTCCGAGAGTTCTTATGGATACATAGATCTTGAGCTTGACTCGTTGCAGAAGATCAATGAGAAAACTGACGTATACAGTTTCGGTGTGGTCCTACTTGAGGTGCTGACAGGAAGGCACCCATTAGATCCAACTCTGCCAGGAGGTATACACTTGGTTCAATGGGTTAAGAATCACTTGGCTAGCAAAGGAGACCCATCTGGAATTCTTGACTCAAATCTTAGAGGGACTAAACCTACTGTTATGCATGAAATACTACAGACTCTAGCTGTGTCATTACTATGTGTCAGTACAAAAGCTTATGACCGTCCAACAATGAAGGACACTGTTGCAATGCTCAACCAATTTCGATACTTTGCTTAG 2796 0.3866 MSTNLNNLSLFHKTFSLTLFLFSVNFLFFPCCNSLDEQGQALIAWKESLNTTSDVLASWNLSNQTPCNWFGVKCNLQGEVEEINLKSLNLQGSSLPSNFQPLKSLKVLVLSSTNITGRVPKEFGDYQELIFIDLSENYLFGEIPDEICRLSKLQTLALHTNSLEGNIPFNIGNLPSLVNLTLYDNKLSGEIPKSIGLLSKLQVFRAGGNKNFKGELPSEIGSCTNLVMLGLAETGISGSIPSSIGMLKKLQTIAIYTTQLSGSIPEEIGNCSELQNLYLYQNSISGSIPPQIGELRKLQSLLLWQNNMVGAIPEELGNCRELSEIDLSENLLTGSIPISFGKLSNLQGLQLSVNQLSGIIPPEISNCSSLIQLEVDNNAITGEIPSVIGNLRNLTLFFAWKNKLTGKIPNSLSECQNLQALDLSYNNLTGSIPKQLFVLRNLTQLMLISNDLEGLIPPDIGNCTSLYRLRLNQNRLVGTIPSEIANLKNLNFLDLHYNHLVGEIPSQFSGLSKLGVLDLSHNKLSGNLDAISNLHNLVSLNVSFNEFSGELPNSPFFRKLPFSDLTGNKGLHIPDGVATPANRTRAKCRVRLDMEIILLILLSISAVLILLTIYVLVRAHVADEAFMRNNNSVTTLYEKFGFFSIDNIVKNFKASNMIDTTNSGVLYKVTIPKGHILTVKKMWPESRASSSEIQMLSSIKHKNIINLLAWGSYKNMMLQFYDYFPSLSSLLHGSEKGKLEWDTRYEVILGLAQALAYLHHDCVPSIFHGDVKATNVLLGPGFHPYLAYYGRTKIASEKGENTDANPVQRPPYSESSYGYIDLELDSLQKINEKTDVYSFGVVLLEVLTGRHPLDPTLPGGIHLVQWVKNHLASKGDPSGILDSNLRGTKPTVMHEILQTLAVSLLCVSTKAYDRPTMKDTVAMLNQFRYFA* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3455 931 Gene3D Ribonuclease Inhibitor 393 575 IPR032675 -
Mtr5g3455 931 Gene3D Ribonuclease Inhibitor 286 388 IPR032675 -
Mtr5g3455 931 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Mtr5g3455 931 SUPERFAMILY Protein kinase-like (PK-like) 636 925 IPR011009 -
Mtr5g3455 931 SMART LRR_typ_2 439 463 IPR003591 -
Mtr5g3455 931 SMART LRR_typ_2 343 367 IPR003591 -
Mtr5g3455 931 SMART LRR_typ_2 295 319 IPR003591 -
Mtr5g3455 931 SMART LRR_typ_2 511 534 IPR003591 -
Mtr5g3455 931 SMART LRR_typ_2 174 198 IPR003591 -
Mtr5g3455 931 SMART LRR_typ_2 487 510 IPR003591 -
Mtr5g3455 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Mtr5g3455 931 ProSiteProfiles Protein kinase domain profile. 652 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3455 931 Gene3D Ribonuclease Inhibitor 193 285 IPR032675 -
Mtr5g3455 931 ProSiteProfiles Leucine-rich repeat profile. 513 535 IPR001611 GO:0005515
Mtr5g3455 931 SUPERFAMILY RNI-like 82 405 - -
Mtr5g3455 931 PRINTS Leucine-rich repeat signature 418 431 - -
Mtr5g3455 931 PRINTS Leucine-rich repeat signature 511 524 - -
Mtr5g3455 931 Pfam Leucine rich repeat 489 546 IPR001611 GO:0005515
Mtr5g3455 931 Pfam Leucine rich repeat 320 380 IPR001611 GO:0005515
Mtr5g3455 931 SUPERFAMILY L domain-like 322 571 - -
Mtr5g3455 931 Pfam Protein kinase domain 664 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3455 931 ProSiteProfiles Leucine-rich repeat profile. 417 439 IPR001611 GO:0005515
Mtr5g3455 931 Gene3D Phosphorylase Kinase; domain 1 623 723 - -
Mtr5g3455 931 Gene3D Transferase(Phosphotransferase) domain 1 725 930 - -
Mtr5g3455 931 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Mtr5g3455 931 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 501 930 - -
Mtr5g3455 931 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 506 - -
Mtr5g3455 931 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 506 - -
Mtr5g3455 931 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 501 930 - -
Mtr5g3455 931 SMART serkin_6 652 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3455 Mtr-Chr5 43406286 43409816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3455 95 930 Receptor kinase-like Gene Family AT5G56040 49.369 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g3455 Pkinase 7.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3455 - - cam:101492613 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3455 5 43406286 43409816 Mtr5g3455 5 43406286 43409816 ECH