Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3448 ATGGAAAATGTGAGAGAGGATGAGATTGAGGCAAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCTTTGGTCATAGCATAGAATTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCGAGTTGAGGAATCCAGTTTCAACCAAGATCCCCCTCTCCCTGTATATCTCAAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGCCAAACAGCTTCCAAAAACCCTGTAAAGACAATGATGTCAAAGGTAGCAACACAACACCATGTAGAAGAAAATAACAAATACAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCGGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACGACCTTGTTAAGAGTTGTAGGAGGAAGATTACTTGATGATGTAAAGGGAAAGATATCTTACAATGATGTTCCATATAGTCCTGCTCTTAAAAGAAGGATTGGATTTGTAACACAAGAGGATGTGCTTTTCCCACAACTTACAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAAGAAAAATATGCAAGAGTTGAGAATACTATCAGGGATCTAGGCCTAGAAAGATGTCGCCACACGAAAATAGGTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCACTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTAGCGAAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTAACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTTTATTATGGGAAGGCTAGAGACACAGCAGAGTACTTTTCATCCTTGAGGTTCGTCCCGGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATTTTGAAAGATCAAGAATCCACTGACCCTTCAGTTACGATTATTAAGTATCTACAACTCAAGTATAAGGACATATTGGAGCCAAAAGAAAAAGAAGAGAATCATAGGGGAGCAAACACACCAAAACATCTTCAACTAGCCATTCAGGTTAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAGAGCAAGATTCAAGGAATATTTTGATATATTGAGATTGGTTCAAGCACTTGGAATTGCACTTCTATTAGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCCGAGATCAGGTTGGTTTAATGTTCTACATTTGCATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCGTTTGAAAAGGTATACTTAAGAAAAGAAAGGAAAGCAGACATGTATAGACTTAGTGTATACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTTATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACCGCGGCTTGCTTCTTCCTTACCTTATTCGCTGTTTTGCTAATAGCAATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAATGGTTGAAGTATATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGTGACCAACTATATGAATGTGAAAGTGATGGAGGGTGCAGAACACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGAGGCCTAAGTGAAGTTTGGATTCTGATAGCCATGGCTATTTGCTTTCGGTTCTTAGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA 2055 0.3942 MENVREDEIEANMSMSPPSVGSMQIAGSFGHSIEFMSQAYLHNRYSEIDIRVEESSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQHHVEENNKYKTILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDDVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQEKYARVENTIRDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFNMFDKLLLISEGSPVYYGKARDTAEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDQESTDPSVTIIKYLQLKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYRARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESDGGCRTLQSSPSFDTVNLKGGLSEVWILIAMAICFRFLAYFCLRRKIDV* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3448 684 Gene3D - 96 327 IPR027417 -
Mtr5g3448 684 Pfam ABC-2 type transporter 289 350 IPR043926 GO:0140359
Mtr5g3448 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 681 - -
Mtr5g3448 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 332 IPR003439 GO:0005524
Mtr5g3448 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 681 - -
Mtr5g3448 684 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Mtr5g3448 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Mtr5g3448 684 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Mtr5g3448 684 SMART AAA_5 119 309 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3448 Mtr-Chr5 43334697 43339346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3448 109 309 Calmodulin-binding Proteins AT2G36910 30.583 5.80e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3448 K05681 - gmx:100815259 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3448 5 43334697 43339346 Mtr5g3448 5 43334697 43339346 ECH